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6P0P

Human beta-tryptase co-crystal structure with 5-{4-[3-(aminomethyl)phenyl]piperidine-1-carbonyl}-2-(3'-{4-[3-(aminomethyl)phenyl]piperidine-1-carbonyl}-[1,1'-biphenyl]-3-yl)-2-hydroxy-2H-1,3,2-benzodioxaborol-2-uide

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
B0004252molecular_functionserine-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue Y35 A 301
ChainResidue
AASP218
ASO4302
APGE303
AHOH433
BGLN117
BASP218
BSER219
BCYS220
BSER224
BTRP244
BGLY245
ASER219
BGLU246
BGLY247
BPGE304
AGLN221
ASER224
ATRP244
AGLY245
AGLU246
AGLY247
ACYS248

site_idAC2
Number of Residues6
Detailsbinding site for residue SO4 A 302
ChainResidue
AHIS74
AGLN221
AGLY222
ASER224
AY35301
APGE303

site_idAC3
Number of Residues8
Detailsbinding site for residue PGE A 303
ChainResidue
AHIS74
APRO78
APHE113
ATYR114
AALA116
ASER243
AY35301
ASO4302

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 B 301
ChainResidue
BHIS74
BGLN221
BGLY222
BSER224
BPGE304

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 B 302
ChainResidue
BASN214
BTHR215
BARG216

site_idAC6
Number of Residues6
Detailsbinding site for residue MES B 303
ChainResidue
ALYS132
ASER134
BARG203
BARG206
BASP207
BHOH455

site_idAC7
Number of Residues9
Detailsbinding site for residue PGE B 304
ChainResidue
AY35301
BHIS74
BPRO78
BTYR114
BALA116
BSER243
BTRP244
BSO4301
BHOH428

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
ALEU70-CYS75

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPLV
ChainResidueDetails
AASP218-VAL229

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS74
AASP121
ASER224
BHIS74
BASP121
BSER224

site_idSWS_FT_FI2
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
ALYS132
BLYS132

site_idSWS_FT_FI3
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN233
BASN233

224931

PDB entries from 2024-09-11

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