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6MBP

GLP Methyltransferase with Inhibitor EML741- P3121 Crystal Form

Functional Information from GO Data
ChainGOidnamespacecontents
A0002039molecular_functionp53 binding
A0005634cellular_componentnucleus
A0008270molecular_functionzinc ion binding
A0016279molecular_functionprotein-lysine N-methyltransferase activity
A0042054molecular_functionhistone methyltransferase activity
B0002039molecular_functionp53 binding
B0005634cellular_componentnucleus
B0008270molecular_functionzinc ion binding
B0016279molecular_functionprotein-lysine N-methyltransferase activity
B0042054molecular_functionhistone methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue JDG A 2001
ChainResidue
ATYR1124
ATYR1211
AARG1214
APHE1215
ALYS1219
AHOH2109
AHOH2191
AASP1131
AALA1134
AASP1135
AARG1137
AASP1140
ASER1141
ALEU1143
AASP1145

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 2002
ChainResidue
ACYS1037
ACYS1074
ACYS1080
ACYS1084

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 2003
ChainResidue
ACYS1031
ACYS1044
ACYS1074
ACYS1078

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 2004
ChainResidue
ACYS1031
ACYS1033
ACYS1037
ACYS1042

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 2005
ChainResidue
ACYS1172
ACYS1225
ACYS1227
ACYS1232

site_idAC6
Number of Residues16
Detailsbinding site for residue SAH A 2006
ChainResidue
AMET1105
ATRP1107
ASER1141
ATYR1142
AARG1166
APHE1167
AASN1169
AHIS1170
ATYR1211
APHE1215
ACYS1225
AARG1226
AHOH2127
AHOH2139
AHOH2222
AHOH2253

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 2007
ChainResidue
ACYS1033
AILE1034
AASP1035
ASER1039
AASN1041
BLEU1047

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 2008
ChainResidue
AASN1013
ALEU1128
AHIS1185
APHE1190
AARG1192
AHOH2102
AHOH2155

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 2009
ChainResidue
AMET1065
APRO1174
AHOH2103

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 2010
ChainResidue
AGLY986
AGLU988
AARG989

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 2011
ChainResidue
ATYR1161
BALA1077
BHOH1464

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 2012
ChainResidue
AALA1077
AHOH2106
AHOH2227

site_idAD4
Number of Residues8
Detailsbinding site for residue EDO A 2013
ChainResidue
AARG985
ATYR987
ALYS1008
ATYR1009
AHOH2236
BCYS1078
BSER1079
BCYS1080

site_idAD5
Number of Residues16
Detailsbinding site for residue JDG B 1301
ChainResidue
BTYR1124
BASP1131
BASP1135
BARG1137
BGLU1138
BASP1140
BSER1141
BLEU1143
BASP1145
BVAL1153
BCYS1155
BTYR1211
BARG1214
BPHE1215
BLYS1219
BEDO1308

site_idAD6
Number of Residues4
Detailsbinding site for residue ZN B 1302
ChainResidue
BCYS1042
BCYS1031
BCYS1033
BCYS1037

site_idAD7
Number of Residues4
Detailsbinding site for residue ZN B 1303
ChainResidue
BCYS1037
BCYS1074
BCYS1080
BCYS1084

site_idAD8
Number of Residues4
Detailsbinding site for residue ZN B 1304
ChainResidue
BCYS1031
BCYS1044
BCYS1074
BCYS1078

site_idAD9
Number of Residues4
Detailsbinding site for residue ZN B 1305
ChainResidue
BCYS1172
BCYS1225
BCYS1227
BCYS1232

site_idAE1
Number of Residues13
Detailsbinding site for residue SAH B 1306
ChainResidue
BMET1105
BTRP1107
BSER1141
BTYR1142
BARG1166
BASN1169
BHIS1170
BTYR1211
BPHE1223
BCYS1225
BARG1226
BHOH1442
BHOH1476

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO B 1307
ChainResidue
BASP1056
BARG1087
BASN1091
BARG1094
BHOH1567

site_idAE3
Number of Residues4
Detailsbinding site for residue EDO B 1308
ChainResidue
BASP1210
BTYR1211
BJDG1301
BHOH1519

site_idAE4
Number of Residues6
Detailsbinding site for residue EDO B 1309
ChainResidue
BASN1075
BHIS1076
BARG1082
BARG1087
BGLN1090
BHOH1518

site_idAE5
Number of Residues4
Detailsbinding site for residue EDO B 1310
ChainResidue
BASP1054
BLYS1055
BARG1085
BHOH1403

site_idAE6
Number of Residues5
Detailsbinding site for residue EDO B 1311
ChainResidue
BCYS1033
BILE1034
BASP1035
BSER1039
BASN1041

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues34
DetailsBINDING:
ChainResidueDetails
ACYS1031
AMET1105
ATYR1142
AASN1169
ACYS1172
ACYS1225
AARG1226
ACYS1227
ACYS1232
BCYS1031
BCYS1033
ACYS1033
BCYS1037
BCYS1042
BCYS1044
BCYS1074
BCYS1078
BCYS1080
BCYS1084
BMET1105
BTYR1142
BASN1169
ACYS1037
BCYS1172
BCYS1225
BARG1226
BCYS1227
BCYS1232
ACYS1042
ACYS1044
ACYS1074
ACYS1078
ACYS1080
ACYS1084

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Histone H3K9me binding => ECO:0000269|PubMed:18264113, ECO:0000269|PubMed:20084102
ChainResidueDetails
ATYR1124
BTYR1124

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER1017
BSER1017

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PDB entries from 2024-11-06

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