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6KM7

The structural basis for the internal interaction in RBBP5

Functional Information from GO Data
ChainGOidnamespacecontents
A0048188cellular_componentSet1C/COMPASS complex
B0048188cellular_componentSet1C/COMPASS complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 A 401
ChainResidue
AARG76
AARG118
AARG161
AHOH501
AHOH587
AHOH658

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 402
ChainResidue
AHOH547
ALYS174
AARG190
AHOH503

site_idAC3
Number of Residues4
Detailsbinding site for residue 2PE A 403
ChainResidue
AARG34
ATRP35
BHIS291
CLEU400

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 B 401
ChainResidue
BHIS65
BILE66
BARG103
BHOH505
BHOH529
BHOH536
BHOH663
DLYS451

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 B 402
ChainResidue
BARG34
BARG76
BHOH643

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 B 403
ChainResidue
BARG118
BARG161
BARG162
BHOH506

site_idAC7
Number of Residues6
Detailsbinding site for residue SO4 B 404
ChainResidue
BARG34
BARG76
BARG118
BARG161
BHOH594
BHOH649

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 B 405
ChainResidue
BTHR192
BARG223
BGLU240
BPRO241
BLYS244
BHOH607

site_idAC9
Number of Residues3
Detailsbinding site for residue SO4 B 406
ChainResidue
BLYS174
BARG190
BHOH551

site_idAD1
Number of Residues18
Detailsbinding site for residue P6G B 407
ChainResidue
APRO146
AVAL147
AASP148
AASP149
AHOH531
AHOH563
AHOH618
AHOH666
BPRO146
BVAL147
BASP148
BASP149
BASP150
BSER151
BHOH503
BHOH514
BHOH569
BHOH665

site_idAD2
Number of Residues5
Detailsbinding site for residue PG4 C 501
ChainResidue
BASN44
BPRO68
BHOH576
CLEU470
CGLY472

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues82
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues78
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues80
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues78
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues84
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine; by CDK1","evidences":[{"source":"PubMed","id":"7558034","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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