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6JOJ

Crystal structure of PDGFRA T674I in complex with crenolanib by soaking

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004713molecular_functionprotein tyrosine kinase activity
A0004714molecular_functiontransmembrane receptor protein tyrosine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
A0007169biological_processcell surface receptor protein tyrosine kinase signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue 6T2 A 1001
ChainResidue
ALEU599
AALA625
ALYS627
AGLU675
ATYR676
ACYS677
APHE678
ALEU825
AASP836

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 1002
ChainResidue
AARG804
ALYS959
ATYR962
AHIS966

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 1003
ChainResidue
AHIS654
AARG804
AHIS966
ALYS971

site_idAC4
Number of Residues1
Detailsbinding site for residue CL A 1004
ChainResidue
ASER942

site_idAC5
Number of Residues1
Detailsbinding site for residue CL A 1005
ChainResidue
ASER923

site_idAC6
Number of Residues1
Detailsbinding site for residue CL A 1006
ChainResidue
AASP919

site_idAC7
Number of Residues1
Detailsbinding site for residue CL A 1007
ChainResidue
ATHR874

site_idAC8
Number of Residues2
Detailsbinding site for residue CL A 1008
ChainResidue
ALYS623
ALYS939

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues29
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGSGAFGKVVeGtayglsrsqpvmk.....VAVK
ChainResidueDetails
ALEU599-LYS627

site_idPS00109
Number of Residues13
DetailsPROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. CVHrDLAARNVLL
ChainResidueDetails
ACYS814-LEU826

site_idPS00240
Number of Residues14
DetailsRECEPTOR_TYR_KIN_III Receptor tyrosine kinase class III signature. GpHlNIVNLLGACT
ChainResidueDetails
AGLY652-THR665

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10028","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues9
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsSite: {"description":"Breakpoint for interstitial deletion to form the FIP1L1-PDGFRA fusion protein"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine; by autocatalysis","evidences":[{"source":"PubMed","id":"10734113","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine; by autocatalysis","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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