6H8K
Crystal structure of a variant (Q133C in PSST) of Yarrowia lipolytica complex I
これはPDB形式変換不可エントリーです。
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
1 | 0003954 | molecular_function | NADH dehydrogenase activity |
1 | 0005739 | cellular_component | mitochondrion |
1 | 0005743 | cellular_component | mitochondrial inner membrane |
1 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
1 | 0009060 | biological_process | aerobic respiration |
1 | 0016020 | cellular_component | membrane |
1 | 0045271 | cellular_component | respiratory chain complex I |
1 | 1902600 | biological_process | proton transmembrane transport |
3 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
4 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
4 | 0042773 | biological_process | ATP synthesis coupled electron transport |
5 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
5 | 0042773 | biological_process | ATP synthesis coupled electron transport |
6 | 0005739 | cellular_component | mitochondrion |
6 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
6 | 0016020 | cellular_component | membrane |
6 | 0031966 | cellular_component | mitochondrial membrane |
6 | 1902600 | biological_process | proton transmembrane transport |
A | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
A | 0016020 | cellular_component | membrane |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0042773 | biological_process | ATP synthesis coupled electron transport |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
C | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
C | 0048038 | molecular_function | quinone binding |
C | 0051287 | molecular_function | NAD binding |
G | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
G | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
I | 0016020 | cellular_component | membrane |
I | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
I | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
K | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
K | 0048038 | molecular_function | quinone binding |
K | 0051536 | molecular_function | iron-sulfur cluster binding |
K | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
L | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
L | 0042773 | biological_process | ATP synthesis coupled electron transport |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 3 |
詳細 | binding site for residue FES A 900 |
鎖名 | 残基 |
A | CYS69 |
A | CYS80 |
A | CYS97 |
site_id | AC2 |
残基数 | 4 |
詳細 | binding site for residue SF4 A 901 |
鎖名 | 残基 |
A | CYS133 |
A | CYS136 |
A | ASP137 |
A | CYS142 |
site_id | AC3 |
残基数 | 5 |
詳細 | binding site for residue SF4 A 902 |
鎖名 | 残基 |
A | CYS186 |
A | THR187 |
A | CYS189 |
A | CYS183 |
A | ILE184 |
site_id | AC4 |
残基数 | 6 |
詳細 | binding site for residue SF4 B 500 |
鎖名 | 残基 |
B | CYS381 |
B | GLY382 |
B | CYS384 |
B | CYS387 |
B | CYS427 |
B | LEU429 |
site_id | AC5 |
残基数 | 6 |
詳細 | binding site for residue FES H 300 |
鎖名 | 残基 |
H | CYS127 |
H | PRO131 |
H | CYS132 |
H | CYS168 |
H | GLY170 |
H | CYS172 |
site_id | AC6 |
残基数 | 9 |
詳細 | binding site for residue SF4 I 500 |
鎖名 | 残基 |
I | CYS140 |
I | CYS169 |
I | ILE170 |
I | TYR171 |
I | CYS172 |
I | GLY173 |
I | TYR174 |
I | CYS175 |
I | GLU186 |
site_id | AC7 |
残基数 | 7 |
詳細 | binding site for residue SF4 I 501 |
鎖名 | 残基 |
I | CYS130 |
I | CYS133 |
I | CYS136 |
I | TYR162 |
I | CYS179 |
I | VAL181 |
I | ILE184 |
site_id | AC8 |
残基数 | 7 |
詳細 | binding site for residue SF4 K 500 |
鎖名 | 残基 |
K | CYS85 |
K | CYS86 |
K | GLY121 |
K | SER149 |
K | CYS150 |
K | CYS180 |
K | PRO181 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00198 |
残基数 | 12 |
詳細 | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP |
鎖名 | 残基 | 詳細 |
I | CYS130-PRO141 | |
I | CYS169-PRO180 |
site_id | PS00535 |
残基数 | 12 |
詳細 | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLiEyK |
鎖名 | 残基 | 詳細 |
C | LEU119-LYS130 |
site_id | PS00542 |
残基数 | 22 |
詳細 | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREayDMYgvffegHpdlRrIM |
鎖名 | 残基 | 詳細 |
G | GLU179-MET200 |
site_id | PS00642 |
残基数 | 13 |
詳細 | COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPvCDqGGeCdLQ |
鎖名 | 残基 | 詳細 |
A | CYS133-GLN145 |
site_id | PS00667 |
残基数 | 16 |
詳細 | COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQaFaDAVKLLlKE |
鎖名 | 残基 | 詳細 |
1 | GLY46-GLU61 |
site_id | PS00668 |
残基数 | 14 |
詳細 | COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLTESEseLVa.G |
鎖名 | 残基 | 詳細 |
1 | PRO201-GLY214 |
site_id | PS01150 |
残基数 | 17 |
詳細 | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRIVPVDVYvPgCPP |
鎖名 | 残基 | 詳細 |
K | GLY166-PRO182 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 40 |
詳細 | TRANSMEM: Helical => ECO:0000255 |
鎖名 | 残基 | 詳細 |
L | ASN21-LEU41 | |
2 | UNK339-UNK359 | |
2 | VAL361-PHE381 | |
5 | ALA472-UNK492 | |
5 | UNK532-UNK561 | |
5 | GLY591-LEU622 | |
L | PHE55-VAL75 | |
6 | LEU94-ASN114 | |
6 | ALA159-ILE179 | |
2 | ALA153-ASN173 | |
2 | LEU197-LEU217 | |
2 | ILE230-LEU250 | |
2 | VAL273-ALA293 | |
2 | LEU284-ASN304 |