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6GVN

Tubulin:TM-3 DARPin complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000226biological_processmicrotubule cytoskeleton organization
A0000278biological_processmitotic cell cycle
A0000793cellular_componentcondensed chromosome
A0001764biological_processneuron migration
A0001964biological_processstartle response
A0005200molecular_functionstructural constituent of cytoskeleton
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0005879cellular_componentaxonemal microtubule
A0005881cellular_componentcytoplasmic microtubule
A0005886cellular_componentplasma membrane
A0006886biological_processintracellular protein transport
A0007017biological_processmicrotubule-based process
A0007098biological_processcentrosome cycle
A0007224biological_processsmoothened signaling pathway
A0007613biological_processmemory
A0007626biological_processlocomotory behavior
A0008344biological_processadult locomotory behavior
A0008542biological_processvisual learning
A0009612biological_processresponse to mechanical stimulus
A0010001biological_processglial cell differentiation
A0010467biological_processgene expression
A0015630cellular_componentmicrotubule cytoskeleton
A0016787molecular_functionhydrolase activity
A0021542biological_processdentate gyrus development
A0021696biological_processcerebellar cortex morphogenesis
A0021766biological_processhippocampus development
A0021859biological_processpyramidal neuron differentiation
A0021987biological_processcerebral cortex development
A0022008biological_processneurogenesis
A0030182biological_processneuron differentiation
A0030534biological_processadult behavior
A0031594cellular_componentneuromuscular junction
A0034612biological_processresponse to tumor necrosis factor
A0035641biological_processlocomotory exploration behavior
A0036464cellular_componentcytoplasmic ribonucleoprotein granule
A0042802molecular_functionidentical protein binding
A0044877molecular_functionprotein-containing complex binding
A0045202cellular_componentsynapse
A0046785biological_processmicrotubule polymerization
A0046872molecular_functionmetal ion binding
A0046982molecular_functionprotein heterodimerization activity
A0048853biological_processforebrain morphogenesis
A0048873biological_processhomeostasis of number of cells within a tissue
A0050807biological_processregulation of synapse organization
A0050808biological_processsynapse organization
A0051402biological_processneuron apoptotic process
A0055037cellular_componentrecycling endosome
A0061744biological_processmotor behavior
A0071277biological_processcellular response to calcium ion
A0072384biological_processorganelle transport along microtubule
A0140058biological_processneuron projection arborization
A1902065biological_processresponse to L-glutamate
B0000166molecular_functionnucleotide binding
B0000226biological_processmicrotubule cytoskeleton organization
B0000278biological_processmitotic cell cycle
B0003924molecular_functionGTPase activity
B0005200molecular_functionstructural constituent of cytoskeleton
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0007010biological_processcytoskeleton organization
B0007017biological_processmicrotubule-based process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues29
Detailsbinding site for residue GTP A 501
ChainResidue
AGLY10
AGLY143
AGLY144
ATHR145
AGLY146
AILE171
AVAL177
ATHR179
AGLU183
AASN206
ATYR224
AGLN11
AASN228
AILE231
AMG502
AHOH602
AHOH603
AHOH605
AHOH612
AHOH621
AHOH627
BLYS254
AALA12
AGLN15
AASP69
AASP98
AALA99
AASN101
ASER140

site_idAC2
Number of Residues4
Detailsbinding site for residue MG A 502
ChainResidue
AGTP501
AHOH602
AHOH603
AHOH627

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 503
ChainResidue
ATYR262
APRO263
AARG264

site_idAC4
Number of Residues22
Detailsbinding site for residue GTP B 501
ChainResidue
BGLY10
BGLN11
BCYS12
BGLN15
BALA99
BGLY100
BASN101
BSER140
BGLY143
BGLY144
BTHR145
BGLY146
BVAL177
BSER178
BGLU183
BASN206
BTYR224
BASN228
BMG502
BHOH608
BHOH614
BHOH618

site_idAC5
Number of Residues2
Detailsbinding site for residue MG B 502
ChainResidue
BGLN11
BGTP501

site_idAC6
Number of Residues9
Detailsbinding site for residue MES B 503
ChainResidue
ATRP407
BARG158
BPRO162
BASP163
BARG164
BASN197
BASP199
BARG253
BHOH625

site_idAC7
Number of Residues4
Detailsbinding site for residue GOL B 504
ChainResidue
BTHR180
BVAL182
BPHE404
BTRP407

site_idAC8
Number of Residues3
Detailsbinding site for residue GOL F 201
ChainResidue
BASP179
FGLY91
FGLU127

Functional Information from PROSITE/UniProt
site_idPS00227
Number of Residues7
DetailsTUBULIN Tubulin subunits alpha, beta, and gamma signature. GGGTGSG
ChainResidueDetails
AGLY142-GLY148
BGLY142-GLY148

site_idPS00228
Number of Residues4
DetailsTUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MREI
ChainResidueDetails
BMET1-ILE4

217705

PDB entries from 2024-03-27

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