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6FY2

Crystal structure of a V2p-reactive RV144 vaccine-like antibody, CAP228-16H, in complex with a heterologous CAP225 V1V2

Functional Information from GO Data
ChainGOidnamespacecontents
P0005618cellular_componentcell wall
Z0005618cellular_componentcell wall
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 H 301
ChainResidue
HARG28
HHOH440
HHOH443
HHOH455
XARG28

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 H 302
ChainResidue
HARG100
PARG166
PLYS169
PARG173

site_idAC3
Number of Residues7
Detailsbinding site for residue GOL L 301
ChainResidue
LGLN37
LARG39
LLEU45
LPRO59
LPHE62
LGLY81
LASP82

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL L 302
ChainResidue
LSER76
LARG77
LHOH456
LHOH466

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL L 303
ChainResidue
HGLY42
LASP85
LTYR87
LGLY100
LHOH421
LHOH452

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL Y 301
ChainResidue
YGLN37
YARG39
YLEU45
YPHE62
YASP82

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 Z 301
ChainResidue
XARG100
ZLYS169
ZARG173

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PgtTAtITCGGV
ChainResidueDetails
LPRO15-VAL26

site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YYCQVWH
ChainResidueDetails
LTYR86-HIS92
LTYR191-HIS197
HTYR194-HIS200

224201

PDB entries from 2024-08-28

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