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6FB9

Crystal Structure of the I-CreI Homing Endonuclease D75N variant in complex with an altered version of its target DNA at 5NNN region in the presence of Manganese

Functional Information from GO Data
ChainGOidnamespacecontents
A0004519molecular_functionendonuclease activity
A0006314biological_processintron homing
A0009507cellular_componentchloroplast
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
B0004519molecular_functionendonuclease activity
B0006314biological_processintron homing
B0009507cellular_componentchloroplast
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MN E 701
ChainResidue
AASP20
BGLY219
DDG515
EDC614
EHOH801

site_idAC2
Number of Residues7
Detailsbinding site for residue MN E 702
ChainResidue
DDG515
EDC614
FDG615
AGLY19
AASP20
BASP220
CDC514

site_idAC3
Number of Residues5
Detailsbinding site for residue MN C 601
ChainResidue
AGLY19
AHOH303
BASP220
CDC514
FDG615

site_idAC4
Number of Residues5
Detailsbinding site for residue PGO A 201
ChainResidue
ATYR12
APHE54
ALEU58
AGLU61
BLYS296

site_idAC5
Number of Residues8
Detailsbinding site for residue PGO A 202
ChainResidue
ALEU97
ALYS98
AGLN101
ALEU135
AASN136
BARG251
FDG615
FDC616

site_idAC6
Number of Residues5
Detailsbinding site for residue MN A 203
ChainResidue
AALA134
AASN136
AHOH305
AHOH307
BHOH509

site_idAC7
Number of Residues6
Detailsbinding site for residue PGO B 401
ChainResidue
ALYS96
BPHE209
BPHE254
BLYS257
BLEU258
BGLU261

site_idAC8
Number of Residues8
Detailsbinding site for residue PGO B 402
ChainResidue
AARG51
BLEU297
BLYS298
BGLN301
BLEU335
BASN336
DDG515
DDA516

site_idAC9
Number of Residues7
Detailsbinding site for residue MN B 403
ChainResidue
AHOH301
BALA334
BASN336
BHOH502
BHOH506
BHOH508
BHOH510

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AGLY19
AASP20
BGLY219
BASP220

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 233
ChainResidueDetails
AGLY19metal ligand
AASP20metal ligand

site_idMCSA2
Number of Residues2
DetailsM-CSA 233
ChainResidueDetails
BGLY219metal ligand
BASP220metal ligand

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PDB entries from 2024-07-24

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