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6F59

Crystal structure of human Brachyury (T) G177D variant in complex with DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
A0045893biological_processpositive regulation of DNA-templated transcription
B0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
B0045893biological_processpositive regulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NA A 301
ChainResidue
ALYS66
AASN67
ATHR149
ALYS151
AASN153
AGLN157

site_idAC2
Number of Residues6
Detailsbinding site for residue MPD A 302
ChainResidue
ATHR183
AHOH407
AHOH429
ALEU42
ATYR88
AILE172

Functional Information from PROSITE/UniProt
site_idPS01264
Number of Residues19
DetailsTBOX_2 T-box domain signature 2. IHPDSpnfGahWMkapVsF
ChainResidueDetails
AILE125-PHE143

site_idPS01283
Number of Residues20
DetailsTBOX_1 T-box domain signature 1. LWlrFkeltNEMIVTknGRR
ChainResidueDetails
ALEU51-ARG70

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues336
DetailsDNA_BIND: T-box => ECO:0000255|PROSITE-ProRule:PRU00201
ChainResidueDetails
ALEU51-ASP219
BLEU51-ASP219

237735

PDB entries from 2025-06-18

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