6EO8

Crystal structure of thrombin in complex with a novel glucose-conjugated potent inhibitor

Replaces:  4N3L

Functional Information from GO Data

Chain	GOid	namespace	contents
H	0004252	molecular_function	serine-type endopeptidase activity
H	0005509	molecular_function	calcium ion binding
H	0006508	biological_process	proteolysis
H	0007596	biological_process	blood coagulation
L	0004252	molecular_function	serine-type endopeptidase activity
L	0005576	cellular_component	extracellular region
L	0006508	biological_process	proteolysis
L	0007596	biological_process	blood coagulation

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue DMS H 301

Chain	Residue
H	SER20
H	VAL157
H	VAL158
H	ASN159
H	LYS186

---

site_id	AC2
Number of Residues	4
Details	binding site for residue DMS H 302

Chain	Residue
H	ARG101
H	ASN179
H	ARG233
H	ARG233

---

site_id	AC3
Number of Residues	5
Details	binding site for residue DMS H 303

Chain	Residue
H	ASP100
H	ARG101
H	THR177
H	ASP178
H	ASN179

---

site_id	AC4
Number of Residues	4
Details	binding site for residue DMS H 304

Chain	Residue
H	LEU130
H	VAL163
H	ARG165
H	HOH432

---

site_id	AC5
Number of Residues	7
Details	binding site for residue DMS H 305

Chain	Residue
H	HIS57
H	TYR60
H	TRP60
H	SER214
H	TRP215
H	2FN307
H	HOH405

---

site_id	AC6
Number of Residues	4
Details	binding site for residue DMS H 306

Chain	Residue
H	GLU127
H	SER171
H	PHE204
H	LYS224

---

site_id	AC7
Number of Residues	20
Details	binding site for residue 2FN H 307

Chain	Residue
H	TYR60
H	GLU97
H	SER129
H	ILE174
H	ASP189
H	ALA190
H	GLU192
H	PHE204
H	VAL213
H	TRP215
H	GLY216
H	GLU217
H	GLY219
H	ARG221
H	LYS224
H	GLY226
H	PHE227
H	TYR228
H	DMS305
H	HOH410

---

Functional Information from PROSITE/UniProt

site_id	PS00134
Number of Residues	6
Details	TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC

Chain	Residue	Details
H	LEU53-CYS58

---

site_id	PS00135
Number of Residues	12
Details	TRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV

Chain	Residue	Details
H	ASP189-VAL200

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	22
Details	Region: {"description":"High affinity receptor-binding region which is also known as the TP508 peptide"}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	3
Details	Active site: {"description":"Charge relay system"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	Glycosylation: {"description":"N-linked (GlcNAc...) (complex) asparagine","evidences":[{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19139490","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19838169","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"873923","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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