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6DPH

Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mn2+ and 200 mM K+ for 120 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AK203
AHOH331
bC5
bHOH103

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues7
Detailsbinding site for residue K A 203
ChainResidue
AASP71
AVAL72
AASP192
AMG201
AHOH331
bC5
bG6

site_idAC4
Number of Residues6
Detailsbinding site for residue K A 204
ChainResidue
AASP71
AGLU109
AASP132
AHOH358
BU4
bC5

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
ATYR83

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 207
ChainResidue
AILE64
AHOH459
AHOH465

site_idAC7
Number of Residues2
Detailsbinding site for residue IOD A 208
ChainResidue
AHIS172
AHOH449

site_idAC8
Number of Residues8
Detailsbinding site for residue GOL A 209
ChainResidue
AGLU66
ALEU120
AARG123
ASER125
ALYS127
AHOH311
AHOH380
AHOH402

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL A 210
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH302
AHOH333

site_idAD1
Number of Residues6
Detailsbinding site for residue PGE A 211
ChainResidue
ALYS180
AGLN182
ATHR183
AASP184
BA3
BU4

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 212
ChainResidue
APRO78
ALEU149
AVAL150
AHOH306
AHOH317
CHOH207

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO A 213
ChainResidue
AARG97
ALEU157
ALEU161
ATHR173
AHOH338
AHOH357

site_idAD4
Number of Residues6
Detailsbinding site for residue GOL A 214
ChainResidue
AGLY76
AASN77
APRO78
AHOH301
CDG2
CDA3

site_idAD5
Number of Residues7
Detailsbinding site for residue GOL A 215
ChainResidue
ATYR119
AGLU122
AARG123
AGLU167
AHOH329
AHOH379
AHOH429

site_idAD6
Number of Residues4
Detailsbinding site for residue K C 101
ChainResidue
CDT4
CDG5
CHOH214
bHOH108

site_idAD7
Number of Residues6
Detailsbinding site for residue EDO C 102
ChainResidue
ATHR148
CDT4
CDG5
CDT6
CHOH201
CHOH215

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

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PDB entries from 2024-07-24

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