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6DOV

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 80 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH314
bC5
bHOH101
bHOH103

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues9
Detailsbinding site for residue RB A 203
ChainResidue
AASP192
AGLY194
AARG195
ARB205
AHOH314
AHOH315
AHOH346
bC5
bG6

site_idAC4
Number of Residues5
Detailsbinding site for residue RB A 204
ChainResidue
AASP132
AHOH337
BU4
BHOH104
bC5

site_idAC5
Number of Residues6
Detailsbinding site for residue RB A 205
ChainResidue
AGLU188
AASP192
ARB203
AHOH314
AHOH315
bC5

site_idAC6
Number of Residues5
Detailsbinding site for residue RB A 206
ChainResidue
ALYS121
AASN124
AHOH421
AHOH425
AHOH446

site_idAC7
Number of Residues2
Detailsbinding site for residue CL A 207
ChainResidue
ATYR83
AGOL212

site_idAC8
Number of Residues3
Detailsbinding site for residue CL A 208
ChainResidue
AHOH365
AHOH443
AHOH461

site_idAC9
Number of Residues4
Detailsbinding site for residue CL A 209
ChainResidue
APRO177
AHOH428
AHOH429
AHOH467

site_idAD1
Number of Residues9
Detailsbinding site for residue GOL A 210
ChainResidue
AHIS115
AARG118
ATYR119
AARG123
AGLU167
AASN170
AGOL212
AHOH302
AHOH335

site_idAD2
Number of Residues6
Detailsbinding site for residue GOL A 211
ChainResidue
AGLU66
ASER125
ALYS127
AHOH325
AHOH327
AHOH377

site_idAD3
Number of Residues7
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AARG118
AASN170
ACL207
AGOL210
AHOH380
AHOH417

site_idAD4
Number of Residues4
Detailsbinding site for residue EDO A 213
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH407

site_idAD5
Number of Residues4
Detailsbinding site for residue RB C 101
ChainResidue
BHOH107
CDT4
CDG5
CHOH212

site_idAD6
Number of Residues5
Detailsbinding site for residue GOL C 102
ChainResidue
AGLY76
AASN77
APRO78
CDG2
CDA3

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP192
AASP71
AGLU109
AASP132

221051

PDB entries from 2024-06-12

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