6DOV
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 80 s at 21 C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.656, 37.396, 61.670 |
Unit cell angles | 90.00, 96.51, 90.00 |
Refinement procedure
Resolution | 20.058 - 1.521 |
R-factor | 0.1547 |
Rwork | 0.153 |
R-free | 0.18960 |
Starting model (for MR) | pdbid 1ZBL |
RMSD bond length | 0.008 |
RMSD bond angle | 1.155 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.060 | 20.060 | 1.550 |
High resolution limit [Å] | 1.520 | 8.330 | 1.520 |
Rmerge | 0.033 | 0.019 | 0.744 |
Rmeas | 0.047 | 0.027 | 1.052 |
Rpim | 0.033 | 0.019 | 0.744 |
Total number of observations | 53577 | ||
Number of reflections | 28106 | 189 | 1005 |
<I/σ(I)> | 10.3 | ||
Completeness [%] | 97.9 | 93.2 | 69.5 |
Redundancy | 1.9 | 1.8 | 1.7 |
CC(1/2) | 0.999 | 0.998 | 0.365 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 14% PEG3350, 20% glycerol, 200 mM KI, and 25 mM CaCl2 |