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6BS1

Crystal Structure of Human DNA polymerase kappa in complex with DNA containing the major cisplatin lesion

Functional Information from GO Data
ChainGOidnamespacecontents
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006281biological_processDNA repair
B0003684molecular_functiondamaged DNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 601
ChainResidue
AASP107
AMET108
AASP198
AMG603
ADZ4609

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 602
ChainResidue
CHOH101
AARG352
AVAL354
AILE357
CDC12

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 603
ChainResidue
AASP107
AASP198
AGLU199
AMG601
ADZ4609
CDC13

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 606
ChainResidue
AASN338

site_idAC5
Number of Residues3
Detailsbinding site for residue IOD A 607
ChainResidue
AASN170
AASP172
BARG420

site_idAC6
Number of Residues2
Detailsbinding site for residue IOD A 608
ChainResidue
AMET117
AASN140

site_idAC7
Number of Residues15
Detailsbinding site for residue DZ4 A 609
ChainResidue
AASP107
AMET108
AASP109
AALA110
APHE111
ATYR112
ASER137
ATHR138
ATYR141
AARG144
AASP198
AMG601
AMG603
CDC13
DDT5

site_idAC8
Number of Residues4
Detailsbinding site for residue MG B 601
ChainResidue
BARG352
BVAL354
BILE357
PDC12

site_idAC9
Number of Residues5
Detailsbinding site for residue MG B 602
ChainResidue
BASP107
BMET108
BASP198
BDZ4607
BMG608

site_idAD1
Number of Residues1
Detailsbinding site for residue IOD B 603
ChainResidue
BLYS468

site_idAD2
Number of Residues2
Detailsbinding site for residue IOD B 605
ChainResidue
BVAL463
BASN464

site_idAD3
Number of Residues15
Detailsbinding site for residue DZ4 B 607
ChainResidue
BASP107
BMET108
BASP109
BALA110
BPHE111
BTYR112
BSER137
BTHR138
BTYR141
BARG144
BASP198
BMG602
BMG608
PDC13
TDT5

site_idAD4
Number of Residues6
Detailsbinding site for residue MG B 608
ChainResidue
BASP107
BASP198
BGLU199
BMG602
BDZ4607
PDC13

site_idAD5
Number of Residues3
Detailsbinding site for residue CPT D 101
ChainResidue
CDA11
DDG6
DDG7

site_idAD6
Number of Residues4
Detailsbinding site for residue CPT T 101
ChainResidue
PDA11
TDG6
TDG7
TDT8

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP107
AASP198
AGLU199
BASP107
BASP198
BGLU199

218853

PDB entries from 2024-04-24

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