6A46
Structure of TREX2 in complex with a nucleotide (dCMP)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0004527 | molecular_function | exonuclease activity |
A | 0005634 | cellular_component | nucleus |
A | 0005737 | cellular_component | cytoplasm |
A | 0006259 | biological_process | DNA metabolic process |
A | 0006281 | biological_process | DNA repair |
A | 0006308 | biological_process | DNA catabolic process |
A | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
A | 0008311 | molecular_function | double-stranded DNA 3'-5' DNA exonuclease activity |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0004527 | molecular_function | exonuclease activity |
B | 0005634 | cellular_component | nucleus |
B | 0005737 | cellular_component | cytoplasm |
B | 0006259 | biological_process | DNA metabolic process |
B | 0006281 | biological_process | DNA repair |
B | 0006308 | biological_process | DNA catabolic process |
B | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
B | 0008311 | molecular_function | double-stranded DNA 3'-5' DNA exonuclease activity |
B | 0008408 | molecular_function | 3'-5' exonuclease activity |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | binding site for residue MG A 301 |
Chain | Residue |
A | ASP14 |
A | MG302 |
A | DCM303 |
A | HOH407 |
A | HOH412 |
A | HOH430 |
A | HOH457 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MG A 302 |
Chain | Residue |
A | ASP193 |
A | MG301 |
A | DCM303 |
A | ASP14 |
A | GLU16 |
site_id | AC3 |
Number of Residues | 16 |
Details | binding site for residue DCM A 303 |
Chain | Residue |
A | LEU15 |
A | GLU16 |
A | ALA17 |
A | LEU20 |
A | LYS73 |
A | ILE77 |
A | THR78 |
A | TYR122 |
A | HIS188 |
A | ASP193 |
A | MG301 |
A | MG302 |
A | HOH414 |
A | HOH430 |
A | HOH431 |
A | HOH457 |
site_id | AC4 |
Number of Residues | 1 |
Details | binding site for residue CA A 304 |
Chain | Residue |
A | LEU172 |
site_id | AC5 |
Number of Residues | 15 |
Details | binding site for residue DCM B 301 |
Chain | Residue |
B | ASP14 |
B | LEU15 |
B | GLU16 |
B | ALA17 |
B | GLY19 |
B | LEU20 |
B | LYS73 |
B | THR78 |
B | TYR122 |
B | HIS188 |
B | ASP193 |
B | MG302 |
B | MG303 |
B | HOH409 |
B | HOH414 |
site_id | AC6 |
Number of Residues | 7 |
Details | binding site for residue MG B 302 |
Chain | Residue |
B | ASP14 |
B | ASP123 |
B | DCM301 |
B | HOH401 |
B | HOH404 |
B | HOH409 |
B | HOH414 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue MG B 303 |
Chain | Residue |
B | ASP14 |
B | GLU16 |
B | ASP193 |
B | DCM301 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue CA B 304 |
Chain | Residue |
B | ASN94 |
B | GLY95 |
B | ALA96 |
B | ARG99 |
site_id | AC9 |
Number of Residues | 2 |
Details | binding site for residue CA B 305 |
Chain | Residue |
B | HIS177 |
B | HIS221 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor/acceptor => ECO:0000250 |
Chain | Residue | Details |
A | HIS188 | |
B | HIS188 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | ASP14 | |
A | GLU16 | |
A | TYR122 | |
A | ASP193 | |
B | ASP14 | |
B | GLU16 | |
B | TYR122 | |
B | ASP193 |