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5YWV

Crystal structure of TREX1 in complex with a inosine contained ssDNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0008408molecular_function3'-5' exonuclease activity
B0003676molecular_functionnucleic acid binding
B0008408molecular_function3'-5' exonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue MG A 301
ChainResidue
AASP18
AGLU20
AASP200
CDG7

site_idAC2
Number of Residues3
Detailsbinding site for residue NA A 302
ChainResidue
ALYS211
AGLN213
AALA214

site_idAC3
Number of Residues2
Detailsbinding site for residue EDO A 303
ChainResidue
ATHR184
ATRP188

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 304
ChainResidue
AASP18
AHOH418
AHOH438
CDI6
CDG7
CHOH210

site_idAC5
Number of Residues5
Detailsbinding site for residue MG B 301
ChainResidue
BASP18
BGLU20
BHIS195
BASP200
DDG7

site_idAC6
Number of Residues7
Detailsbinding site for residue MES B 302
ChainResidue
APRO56
AVAL57
AGLN189
BASP148
BGLY149
BPRO225
BSER227

site_idAC7
Number of Residues3
Detailsbinding site for residue NA B 303
ChainResidue
BGLY23
BLEU24
DDG7

site_idAC8
Number of Residues4
Detailsbinding site for residue NA B 304
ChainResidue
BLYS211
BPRO212
BGLN213
BALA214

site_idAC9
Number of Residues3
Detailsbinding site for residue NA B 305
ChainResidue
BLEU24
BPRO25
BSER26

site_idAD1
Number of Residues6
Detailsbinding site for residue MG B 306
ChainResidue
BASP18
BHOH418
BHOH437
DDI6
DDG7
DHOH204

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000269|PubMed:17355961
ChainResidueDetails
AHIS195
BHIS195

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17293595, ECO:0000269|PubMed:17355961, ECO:0000269|PubMed:18780819, ECO:0000269|PubMed:22071149
ChainResidueDetails
AASP18
AGLU20
ATYR129
AASP200
BASP18
BGLU20
BTYR129
BASP200

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9NSU2
ChainResidueDetails
ASER78
ASER167
BSER78
BSER167

220113

PDB entries from 2024-05-22

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