5YVX

Crystal structure of SDG8 CW domain in complex with H3K4me1 peptide

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0008270	molecular_function	zinc ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN A 1001

Chain	Residue
A	CYS868
A	CYS871
A	CYS893
A	CYS904

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site_id	AC2
Number of Residues	11
Details	binding site for Ligand residues MLZ C 4 through GLN C 5 bound to THR C 3

Chain	Residue
C	THR3
C	THR6
C	ALA7
C	HOH102
C	HOH103
C	HOH106
A	ALA864
A	TRP865
A	VAL882
A	ASN916
A	LEU919

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Functional Information from PROSITE/UniProt

site_id	PS00018
Number of Residues	13
Details	EF_HAND_1 EF-hand calcium-binding domain. DCSKSQEMSneEI

Chain	Residue	Details
A	ASP903-ILE915

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:12581305, ECO:0000269|PubMed:14712277, ECO:0000269|PubMed:15598823, ECO:0000269|PubMed:16258034

Chain	Residue	Details
C	MLZ4
A	CYS871
A	CYS893
A	CYS904

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site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:12456661, ECO:0000269|PubMed:12581305, ECO:0000269|PubMed:14712277, ECO:0000269|PubMed:15014946, ECO:0000269|PubMed:15598823

Chain	Residue	Details
C	LYS9

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