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5YVX

Crystal structure of SDG8 CW domain in complex with H3K4me1 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1001
ChainResidue
ACYS868
ACYS871
ACYS893
ACYS904

site_idAC2
Number of Residues11
Detailsbinding site for Ligand residues MLZ C 4 through GLN C 5 bound to THR C 3
ChainResidue
CTHR3
CTHR6
CALA7
CHOH102
CHOH103
CHOH106
AALA864
ATRP865
AVAL882
AASN916
ALEU919

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DCSKSQEMSneEI
ChainResidueDetails
AASP903-ILE915

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00454","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"21522130","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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