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5Y6U

Crystal structure of wild-type YabJ protein from Bacillus subtilis (natto).

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0019239molecular_functiondeaminase activity
A0046872molecular_functionmetal ion binding
A1901565biological_processorganonitrogen compound catabolic process
B0005829cellular_componentcytosol
B0019239molecular_functiondeaminase activity
B0046872molecular_functionmetal ion binding
B1901565biological_processorganonitrogen compound catabolic process
C0005829cellular_componentcytosol
C0019239molecular_functiondeaminase activity
C0046872molecular_functionmetal ion binding
C1901565biological_processorganonitrogen compound catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ACY A 501
ChainResidue
ATHR2
AVAL23
AASN24
AHOH624
AHOH630

site_idAC2
Number of Residues5
Detailsbinding site for residue ACY A 502
ChainResidue
AHOH686
AHIS9
ASER55
AALA59
AHOH613

site_idAC3
Number of Residues7
Detailsbinding site for residue ACY A 503
ChainResidue
AARG109
APRO111
ALYS112
AHOH679
AHOH691
AHOH716
CMET81

site_idAC4
Number of Residues5
Detailsbinding site for residue ACY B 501
ChainResidue
BTHR2
BVAL23
BASN24
BHOH604
BHOH651

site_idAC5
Number of Residues5
Detailsbinding site for residue ACY B 502
ChainResidue
BLYS8
BHIS9
BPRO37
BHOH647
BHOH712

site_idAC6
Number of Residues8
Detailsbinding site for residue ACY C 201
ChainResidue
AASP96
ATHR97
CLYS8
CHIS9
CPRO37
CHOH320
CHOH323
CHOH334

Functional Information from PROSITE/UniProt
site_idPS01094
Number of Residues19
DetailsUPF0076 Uncharacterized protein family UPF0076 signature. PARScVevArLpkdal...VEI
ChainResidueDetails
APRO100-ILE118

218853

PDB entries from 2024-04-24

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