5Y6F
Crystal structure of YcgR in complex with c-di-GMP from Escherichia coli
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0009288 | cellular_component | bacterial-type flagellum |
| A | 0009425 | cellular_component | bacterial-type flagellum basal body |
| A | 0035438 | molecular_function | cyclic-di-GMP binding |
| A | 0071945 | biological_process | regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed |
| A | 0071973 | biological_process | bacterial-type flagellum-dependent cell motility |
| A | 1902201 | biological_process | negative regulation of bacterial-type flagellum-dependent cell motility |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 301 |
| Chain | Residue |
| A | GLU6 |
| A | ARG114 |
| A | TYR116 |
| A | PHE117 |
| A | ARG118 |
| site_id | AC2 |
| Number of Residues | 19 |
| Details | binding site for residue C2E A 302 |
| Chain | Residue |
| A | ARG118 |
| A | ASP145 |
| A | LEU146 |
| A | SER147 |
| A | GLY149 |
| A | GLY150 |
| A | MET151 |
| A | GLY152 |
| A | ILE189 |
| A | ARG208 |
| A | SER210 |
| A | PHE211 |
| A | ARG212 |
| A | C2E303 |
| A | HOH402 |
| A | ARG113 |
| A | ARG114 |
| A | ARG115 |
| A | TYR116 |
| site_id | AC3 |
| Number of Residues | 21 |
| Details | binding site for residue C2E A 303 |
| Chain | Residue |
| A | GLU6 |
| A | GLU76 |
| A | GLY79 |
| A | ALA80 |
| A | LYS81 |
| A | VAL111 |
| A | ARG113 |
| A | ARG114 |
| A | ARG118 |
| A | ILE189 |
| A | SER190 |
| A | SER192 |
| A | ARG208 |
| A | SER210 |
| A | C2E302 |
| A | HOH407 |
| A | HOH408 |
| A | HOH409 |
| A | HOH413 |
| A | HOH417 |
| A | HOH424 |
