Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5X8R

Structure of the 30S small subunit of chloroplast ribosome from spinach

Functional Information from GO Data

Chain	GOid	namespace	contents
8	0003676	molecular_function	nucleic acid binding
8	0003723	molecular_function	RNA binding
8	0003729	molecular_function	mRNA binding
8	0003735	molecular_function	structural constituent of ribosome
8	0005840	cellular_component	ribosome
8	0006412	biological_process	translation
8	0009507	cellular_component	chloroplast
8	0009570	cellular_component	chloroplast stroma
8	1990904	cellular_component	ribonucleoprotein complex
b	0003735	molecular_function	structural constituent of ribosome
b	0005763	cellular_component	mitochondrial small ribosomal subunit
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0009507	cellular_component	chloroplast
b	0015935	cellular_component	small ribosomal subunit
b	1990904	cellular_component	ribonucleoprotein complex
c	0003723	molecular_function	RNA binding
c	0003735	molecular_function	structural constituent of ribosome
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0009507	cellular_component	chloroplast
c	0019843	molecular_function	rRNA binding
c	0022627	cellular_component	cytosolic small ribosomal subunit
c	1990904	cellular_component	ribonucleoprotein complex
d	0003723	molecular_function	RNA binding
d	0003735	molecular_function	structural constituent of ribosome
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0009507	cellular_component	chloroplast
d	0015935	cellular_component	small ribosomal subunit
d	0019843	molecular_function	rRNA binding
d	0042274	biological_process	ribosomal small subunit biogenesis
d	1990904	cellular_component	ribonucleoprotein complex
e	0003723	molecular_function	RNA binding
e	0003735	molecular_function	structural constituent of ribosome
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0015935	cellular_component	small ribosomal subunit
f	0003735	molecular_function	structural constituent of ribosome
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0019843	molecular_function	rRNA binding
g	0003723	molecular_function	RNA binding
g	0003729	molecular_function	mRNA binding
g	0003735	molecular_function	structural constituent of ribosome
g	0005840	cellular_component	ribosome
g	0006412	biological_process	translation
g	0009507	cellular_component	chloroplast
g	0015935	cellular_component	small ribosomal subunit
g	0019843	molecular_function	rRNA binding
g	1990904	cellular_component	ribonucleoprotein complex
h	0003723	molecular_function	RNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0009507	cellular_component	chloroplast
h	0009536	cellular_component	plastid
h	0019843	molecular_function	rRNA binding
h	1990904	cellular_component	ribonucleoprotein complex
i	0003735	molecular_function	structural constituent of ribosome
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
j	0003723	molecular_function	RNA binding
j	0003735	molecular_function	structural constituent of ribosome
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
k	0003723	molecular_function	RNA binding
k	0003735	molecular_function	structural constituent of ribosome
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
k	0009507	cellular_component	chloroplast
k	0019843	molecular_function	rRNA binding
k	1990904	cellular_component	ribonucleoprotein complex
l	0003723	molecular_function	RNA binding
l	0003735	molecular_function	structural constituent of ribosome
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0009507	cellular_component	chloroplast
l	0015935	cellular_component	small ribosomal subunit
l	0019843	molecular_function	rRNA binding
l	1990904	cellular_component	ribonucleoprotein complex
m	0003676	molecular_function	nucleic acid binding
m	0003723	molecular_function	RNA binding
m	0003735	molecular_function	structural constituent of ribosome
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
n	0003723	molecular_function	RNA binding
n	0003735	molecular_function	structural constituent of ribosome
n	0005737	cellular_component	cytoplasm
n	0005840	cellular_component	ribosome
n	0006412	biological_process	translation
n	0009507	cellular_component	chloroplast
n	0015935	cellular_component	small ribosomal subunit
n	0019843	molecular_function	rRNA binding
n	1990904	cellular_component	ribonucleoprotein complex
o	0003735	molecular_function	structural constituent of ribosome
o	0005737	cellular_component	cytoplasm
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0009507	cellular_component	chloroplast
o	1990904	cellular_component	ribonucleoprotein complex
p	0003735	molecular_function	structural constituent of ribosome
p	0005739	cellular_component	mitochondrion
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0009507	cellular_component	chloroplast
p	0009536	cellular_component	plastid
p	0015935	cellular_component	small ribosomal subunit
p	0032543	biological_process	mitochondrial translation
p	1990904	cellular_component	ribonucleoprotein complex
q	0003735	molecular_function	structural constituent of ribosome
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
r	0003723	molecular_function	RNA binding
r	0003735	molecular_function	structural constituent of ribosome
r	0005763	cellular_component	mitochondrial small ribosomal subunit
r	0005840	cellular_component	ribosome
r	0006412	biological_process	translation
r	0009507	cellular_component	chloroplast
r	0019843	molecular_function	rRNA binding
r	0070181	molecular_function	small ribosomal subunit rRNA binding
r	1990904	cellular_component	ribonucleoprotein complex
s	0000028	biological_process	ribosomal small subunit assembly
s	0003723	molecular_function	RNA binding
s	0003735	molecular_function	structural constituent of ribosome
s	0005737	cellular_component	cytoplasm
s	0005763	cellular_component	mitochondrial small ribosomal subunit
s	0005840	cellular_component	ribosome
s	0006412	biological_process	translation
s	0009507	cellular_component	chloroplast
s	0015935	cellular_component	small ribosomal subunit
s	0019843	molecular_function	rRNA binding
s	1990904	cellular_component	ribonucleoprotein complex
t	0003723	molecular_function	RNA binding
t	0003735	molecular_function	structural constituent of ribosome
t	0005840	cellular_component	ribosome
t	0006412	biological_process	translation
u	0003735	molecular_function	structural constituent of ribosome
u	0005840	cellular_component	ribosome
u	0006412	biological_process	translation
v	0003676	molecular_function	nucleic acid binding
v	0003723	molecular_function	RNA binding
w	0003735	molecular_function	structural constituent of ribosome
w	0005840	cellular_component	ribosome
w	0006412	biological_process	translation
x	0005840	cellular_component	ribosome
y	0044238	biological_process	primary metabolic process

Functional Information from PROSITE/UniProt

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. NrLvnmLVnrilkhGKKslayqILyrA

Chain	Residue	Details
g	ASN20-ALA46

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSrGIMtdreAR

Chain	Residue	Details
h	GLY104-ARG121

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrAIrrS.GIlLsfvrDvTPmPHN

Chain	Residue	Details
k	LEU106-ASN128

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
l	LYS43-ARG50

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDwVqLdKcRPIS

Chain	Residue	Details
q	GLY109-SER121

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYrn.MslIsrFISEq.GKIlsrRV

Chain	Residue	Details
r	ILE28-VAL51

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRehlpiyItdrmVGhkLGEFapT

Chain	Residue	Details
s	ASN53-THR77

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGlsGQaqAislGvARAL

Chain	Residue	Details
i	GLY136-LEU154

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. ArttNAkimGPVpLPT

Chain	Residue	Details
j	ALA122-THR137

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LtlHLelhKkDysSqrgLrkTlgkrqrLlaY

Chain	Residue	Details
o	LEU36-TYR66

site_id	PS00527
Number of Residues	24
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. RrCfltgrpranirdFGLSGhILR

Chain	Residue	Details
n	ARG61-ARG84

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARiewireGrVplQt..IrakIDycaytvrTiyGvlG

Chain	Residue	Details
c	ALA174-GLY208

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GKhmrFrAivVVGDkk.GqVGvGvgkak.EVvs.AV

Chain	Residue	Details
e	GLY169-VAL201

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEmRLdniLFRlgmApTipgARqLV

Chain	Residue	Details
d	LEU87-VAL111

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHklGlpVRGQ

Chain	Residue	Details
m	ARG121-GLN134

site_id	PS00732
Number of Residues	10
Details	RIBOSOMAL_S16 Ribosomal protein S16 signature. VkLRLKRCGR

Chain	Residue	Details
p	VAL2-ARG11

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. LeEMMEAGVHFG

Chain	Residue	Details
b	LEU10-GLY21

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdiVIIvDqqeEytaLrEcitlGIP

Chain	Residue	Details
b	PRO162-PRO186

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	71
Details	Domain: {"description":"KH type-2"}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	63
Details	Domain: {"description":"S5 DRBM"}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	48
Details	Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	60
Details	Domain: {"description":"S4 RNA-binding"}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	78
Details	Domain: {"description":"RRM 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00176","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	76
Details	Domain: {"description":"RRM 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00176","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI7
Number of Residues	68
Details	Domain: {"description":"S1 motif 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00180","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)