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5WS2

Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, complex with RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0004534molecular_function5'-3' RNA exonuclease activity
A0046872molecular_functionmetal ion binding
B0003723molecular_functionRNA binding
B0004534molecular_function5'-3' RNA exonuclease activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue ZN A 501
ChainResidue
AASP86
AHIS87
AASP174
AHIS410
AZN502
AHOH605
CA2

site_idAC2
Number of Residues7
Detailsbinding site for residue ZN A 502
ChainResidue
AHIS152
AASP174
AZN501
AHOH605
CA2
AHIS82
AHIS84

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 503
ChainResidue
AARG36
AARG39
AHOH688

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 504
ChainResidue
AHIS52
AARG97
APHE122
AHOH602

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 505
ChainResidue
AGLY211
AASN213
AARG391
BHOH609

site_idAC6
Number of Residues7
Detailsbinding site for residue ZN B 501
ChainResidue
BASP86
BHIS87
BASP174
BHIS410
BZN502
BHOH601
DA2

site_idAC7
Number of Residues7
Detailsbinding site for residue ZN B 502
ChainResidue
BHIS82
BHIS84
BHIS152
BASP174
BZN501
BHOH601
DA2

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 B 503
ChainResidue
BARG36
BARG39
BHOH650
BHOH673

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 B 504
ChainResidue
BHIS52
BARG76
BHIS96
BARG97
BPHE122

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 B 505
ChainResidue
ALYS373
AHOH604
BASN213
BARG391

site_idAD2
Number of Residues2
Detailsbinding site for residue SO4 B 506
ChainResidue
BHIS223
BLYS227

site_idAD3
Number of Residues3
Detailsbinding site for residue SO4 B 507
ChainResidue
BARG298
BHOH602
DA5

site_idAD4
Number of Residues4
Detailsbinding site for residue SO4 C 101
ChainResidue
AARG271
AARG298
AARG299
CA5

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PDB entries from 2024-07-17

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