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5W9A

The structure of the Trim5alpha Bbox- coiled coil in complex LC3B

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
B0008270molecular_functionzinc ion binding
C0000045biological_processautophagosome assembly
C0000421cellular_componentautophagosome membrane
C0000423biological_processmitophagy
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005739cellular_componentmitochondrion
C0005776cellular_componentautophagosome
C0005829cellular_componentcytosol
C0005856cellular_componentcytoskeleton
C0005874cellular_componentmicrotubule
C0005930cellular_componentaxoneme
C0006914biological_processautophagy
C0006995biological_processcellular response to nitrogen starvation
C0008017molecular_functionmicrotubule binding
C0008429molecular_functionphosphatidylethanolamine binding
C0009267biological_processcellular response to starvation
C0012505cellular_componentendomembrane system
C0016020cellular_componentmembrane
C0016236biological_processmacroautophagy
C0031090cellular_componentorganelle membrane
C0031410cellular_componentcytoplasmic vesicle
C0031625molecular_functionubiquitin protein ligase binding
C0031966cellular_componentmitochondrial membrane
C0043231cellular_componentintracellular membrane-bounded organelle
C0097001molecular_functionceramide binding
C0097352biological_processautophagosome maturation
D0000045biological_processautophagosome assembly
D0000421cellular_componentautophagosome membrane
D0000423biological_processmitophagy
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005739cellular_componentmitochondrion
D0005776cellular_componentautophagosome
D0005829cellular_componentcytosol
D0005856cellular_componentcytoskeleton
D0005874cellular_componentmicrotubule
D0005930cellular_componentaxoneme
D0006914biological_processautophagy
D0006995biological_processcellular response to nitrogen starvation
D0008017molecular_functionmicrotubule binding
D0008429molecular_functionphosphatidylethanolamine binding
D0009267biological_processcellular response to starvation
D0012505cellular_componentendomembrane system
D0016020cellular_componentmembrane
D0016236biological_processmacroautophagy
D0031090cellular_componentorganelle membrane
D0031410cellular_componentcytoplasmic vesicle
D0031625molecular_functionubiquitin protein ligase binding
D0031966cellular_componentmitochondrial membrane
D0043231cellular_componentintracellular membrane-bounded organelle
D0097001molecular_functionceramide binding
D0097352biological_processautophagosome maturation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 301
ChainResidue
ACYS97
AHIS100
ACYS116
ACYS119

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 302
ChainResidue
ACYS108
AASP111
AHIS125
AHIS128

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN B 301
ChainResidue
BHIS100
BCYS116
BCYS119
BCYS97

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN B 302
ChainResidue
BCYS108
BASP111
BHIS125
BHIS128

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00024
ChainResidueDetails
ACYS97
AHIS100
ACYS119
AHIS125
BCYS97
BHIS100
BCYS119
BHIS125

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PDB entries from 2024-05-15

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