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5VLJ

Cryo-EM structure of yeast cytoplasmic dynein with Walker B mutation at AAA3 in presence of ATP-VO4

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0007018biological_processmicrotubule-based movement
A0008569molecular_functionminus-end-directed microtubule motor activity
A0030286cellular_componentdynein complex
A0045505molecular_functiondynein intermediate chain binding
A0051959molecular_functiondynein light intermediate chain binding
Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. IASCsrDqTVKIWDF
ChainResidueDetails
BILE270-PHE284
BCYS373-ILE387

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues221
DetailsRegion: {"description":"AAA 1","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues237
DetailsRegion: {"description":"AAA 2","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues249
DetailsRegion: {"description":"AAA 3","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues262
DetailsRegion: {"description":"AAA 4","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues229
DetailsRegion: {"description":"AAA 5","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues210
DetailsRegion: {"description":"AAA 6","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues100
DetailsCoiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues28
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues78
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues96
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues82
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues78
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues96
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues78
DetailsRepeat: {"description":"WD 6"}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues70
DetailsRepeat: {"description":"WD 7"}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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