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5V4B

Crystal structure of the Skp1-FBXW7-DISC1 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0006511biological_processubiquitin-dependent protein catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue SO4 B 2801
ChainResidue
BPRO2285
BLYS2286

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 B 2802
ChainResidue
BARG2357
BASN2679
BTHR2680
BHOH2952

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 B 2803
ChainResidue
BHOH2942
BHOH2977
BHOH3005
BARG2465
BARG2505
BARG2674

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 B 2804
ChainResidue
BGLN2388
BGLN2428
BARG2676
BHOH2949
BHOH2987

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 B 2805
ChainResidue
BASN2392
BARG2393
BSER2407
BVAL2409
BHOH2905

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 B 2806
ChainResidue
BGLY2422
BGLY2423
BTHR2439
BHOH2915
BHOH2917

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 B 2807
ChainResidue
BARG2415
BTHR2416

site_idAC8
Number of Residues2
Detailsbinding site for residue SO4 B 2808
ChainResidue
BARG2415
BHOH2932

site_idAC9
Number of Residues1
Detailsbinding site for residue SO4 B 2809
ChainResidue
BARG2441

site_idAD1
Number of Residues3
Detailsbinding site for residue IMD B 2810
ChainResidue
BASN2633
BILE2638
BSER2678

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. IISGstDrTLKVWNA
ChainResidueDetails
BILE2434-ALA2448
BVAL2474-ILE2488
BVAL2554-VAL2568
BLEU2594-ILE2608
BVAL2637-LEU2651

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)","evidences":[{"source":"PubMed","id":"25114211","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues46
DetailsDomain: {"description":"F-box","evidences":[{"source":"PROSITE-ProRule","id":"PRU00080","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues40
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues36
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues39
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues36
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues39
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues38
DetailsRepeat: {"description":"WD 6"}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues37
DetailsRepeat: {"description":"WD 7"}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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