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5TD5

Crystal Structure of Human APOBEC3B variant complexed with ssDNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
AHIS253
ACYS284
ACYS289
ACL417

site_idAC2
Number of Residues1
Detailsbinding site for residue IOD A 403
ChainResidue
AHOH569

site_idAC3
Number of Residues2
Detailsbinding site for residue IOD A 404
ChainResidue
AASP194
CDA1

site_idAC4
Number of Residues3
Detailsbinding site for residue IOD A 405
ChainResidue
CDT-2
AARG211
AHIS212

site_idAC5
Number of Residues4
Detailsbinding site for residue IOD A 407
ChainResidue
AARG211
AHIS212
CDT-2
CDA1

site_idAC6
Number of Residues1
Detailsbinding site for residue EDO A 410
ChainResidue
AHOH527

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO A 411
ChainResidue
AGLY251
AARG252
AHIS253
ALEU256
ATRP287
ACYS289
AEDO412
AHOH502

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 412
ChainResidue
AHIS253
ATRP287
ATYR313
AEDO411
CDC0
CDA1

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 413
ChainResidue
AARG374
ALEU377
AHOH508

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO A 414
ChainResidue
AARG190
ATYR191
ATYR218
AGLY236
APHE237
AHOH550

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 415
ChainResidue
AGLY205
ATRP281
CDT-1

site_idAD3
Number of Residues1
Detailsbinding site for residue CL A 416
ChainResidue
AHIS365

site_idAD4
Number of Residues6
Detailsbinding site for residue CL A 417
ChainResidue
AHIS253
APRO283
ACYS284
ACYS289
AZN401
CDC0

site_idAD5
Number of Residues2
Detailsbinding site for residue IOD C 101
ChainResidue
AASP194
CDA1

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000255
ChainResidueDetails
AGLN266

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ASER264
AALA295
AASN300

225399

PDB entries from 2024-09-25

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