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5T8P

Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to benzoxepin compound 2

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0004672molecular_functionprotein kinase activity
B0004674molecular_functionprotein serine/threonine kinase activity
B0005524molecular_functionATP binding
B0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue 774 A 701
ChainResidue
AVAL416
AALA429
AMET471
AGLU472
ALEU473
ALEU474
AASP521
ALEU524
AASP536

site_idAC2
Number of Residues6
Detailsbinding site for residue SO4 A 702
ChainResidue
APRO406
AVAL408
AGLY409
AARG410
AHIS417
AARG418

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 703
ChainResidue
AARG637
ALYS638
AGLU639

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 B 701
ChainResidue
BARG637
BLYS638
BGLU639
BHIS642

site_idAC5
Number of Residues8
Detailsbinding site for residue SO4 B 702
ChainResidue
BHIS404
BPRO406
BVAL408
BGLY409
BVAL416
BHIS417
BARG418
BHOH846

site_idAC6
Number of Residues9
Detailsbinding site for residue 774 B 703
ChainResidue
BVAL416
BALA429
BMET471
BGLU472
BLEU473
BLEU474
BASP521
BLEU524
BASP536

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues25
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGRGSFGEVHrMkdkqtgfqc.........AVKK
ChainResidueDetails
AVAL408-LYS432

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IlHgDVKadNVLL
ChainResidueDetails
AILE513-LEU525

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q99558","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues255
DetailsDomain: {"description":"Protein kinase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues252
DetailsRegion: {"description":"Interaction with ZFP91","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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