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5PAB

Crystal Structure of Factor VIIa in complex with 1-[[3-[2-hydroxy-3-(1H-pyrrolo[3,2-c]pyridin-2-yl)phenyl]phenyl]methyl]-3-phenylurea

Functional Information from GO Data
ChainGOidnamespacecontents
H0004252molecular_functionserine-type endopeptidase activity
H0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue 7XD H 301
ChainResidue
HLEU25
HSER192
HSER211
HTRP212
HGLY213
HGLY215
HGOL304
HHOH415
HHOH519
HHIS41
HCYS42
HASP44
HLYS45
HGLY85
HSER187
HCYS188
HLYS189

site_idAC2
Number of Residues2
Detailsbinding site for residue CL H 302
ChainResidue
HARG72
HHIS97

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL H 303
ChainResidue
HPHE43
HASP44
HARG138
HHOH451
HHOH475

site_idAC4
Number of Residues8
Detailsbinding site for residue GOL H 304
ChainResidue
HGLN24
HLEU25
HLYS189
HGLY190
H7XD301
HHOH407
HHOH413
HHOH415

site_idAC5
Number of Residues1
Detailsbinding site for residue GOL H 305
ChainResidue
HHOH547

site_idAC6
Number of Residues6
Detailsbinding site for residue CA H 306
ChainResidue
HGLU58
HASP60
HGLU63
HGLU68
HHOH432
HHOH564

site_idAC7
Number of Residues1
Detailsbinding site for residue CL H 307
ChainResidue
HARG240

site_idAC8
Number of Residues2
Detailsbinding site for residue CL H 308
ChainResidue
HGLU242
LGOL201

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 H 309
ChainResidue
HMET154
HTHR155
HARG227
HHOH409
HHOH481

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL L 201
ChainResidue
HGLU242
HCL308
LCYS114
LSER119
LLEU120
LHOH308

site_idAD2
Number of Residues5
Detailsbinding site for residue SO4 L 202
ChainResidue
HARG119
LCYS102
LSER103
LASP104
LHOH314

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
HVAL37-CYS42

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPHA
ChainResidueDetails
HASP186-ALA197

site_idPS01186
Number of Residues16
DetailsEGF_2 EGF-like domain signature 2. CrCheGYslladgvsC
ChainResidueDetails
LCYS112-CYS127

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Cleavage; by factor Xa, factor XIIa, factor IXa, or thrombin
ChainResidueDetails
LARG152
HASP90
HSER192

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19167329, ECO:0000269|PubMed:3264725
ChainResidueDetails
LASN145

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19167329, ECO:0000269|PubMed:3264725
ChainResidueDetails
HASN170

223166

PDB entries from 2024-07-31

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