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5NVM

Crystal structure of the human 4EHP-GIGYF2 complex lacking the auxiliary sequences

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue PO4 A 301
ChainResidue
AARG103

site_idAC2
Number of Residues5
Detailsbinding site for residue PO4 B 101
ChainResidue
AARG96
BPRO59
BSER60
BHOH205
BHOH208

site_idAC3
Number of Residues4
Detailsbinding site for residue PO4 C 301
ChainResidue
CHOH403
CARG103
CSER145
CARG146

site_idAC4
Number of Residues5
Detailsbinding site for residue PO4 D 101
ChainResidue
CARG96
DPRO59
DSER60
DHOH201
DHOH207

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DFhlFKegIkPmWEDdanknGGKW
ChainResidueDetails
AASP112-TRP135

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsRegion: {"description":"EIF4EBP1/2/3 binding","evidences":[{"source":"PubMed","id":"17368478","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P06730","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17368478","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ISG15); alternate","evidences":[{"source":"PubMed","id":"17289916","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues20
DetailsMotif: {"description":"4EHP-binding motif","evidences":[{"source":"PubMed","id":"22751931","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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