5NTI
Structural states of RORgt: X-ray elucidation of molecular mechanisms and binding interactions for natural and synthetic compounds
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0004879 | molecular_function | nuclear receptor activity |
A | 0005634 | cellular_component | nucleus |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0003677 | molecular_function | DNA binding |
B | 0004879 | molecular_function | nuclear receptor activity |
B | 0005634 | cellular_component | nucleus |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0003677 | molecular_function | DNA binding |
C | 0004879 | molecular_function | nuclear receptor activity |
C | 0005634 | cellular_component | nucleus |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
D | 0003677 | molecular_function | DNA binding |
D | 0004879 | molecular_function | nuclear receptor activity |
D | 0005634 | cellular_component | nucleus |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | binding site for residue C3S A 601 |
Chain | Residue |
A | CYS285 |
A | HOH734 |
A | GLN286 |
A | LEU287 |
A | TRP317 |
A | CYS320 |
A | HIS323 |
A | ARG364 |
A | MET365 |
A | ARG367 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue C3S B 601 |
Chain | Residue |
B | GLN286 |
B | LEU287 |
B | TRP317 |
B | CYS320 |
B | HIS323 |
B | ARG364 |
B | MET365 |
B | ARG367 |
B | PHE377 |
site_id | AC3 |
Number of Residues | 13 |
Details | binding site for residue C3S C 601 |
Chain | Residue |
C | CYS285 |
C | GLN286 |
C | LEU287 |
C | TRP317 |
C | CYS320 |
C | HIS323 |
C | ALA327 |
C | ARG364 |
C | ARG367 |
C | ALA368 |
C | LEU391 |
C | HIS479 |
C | HOH717 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue C3S D 601 |
Chain | Residue |
D | CYS285 |
D | GLN286 |
D | LEU287 |
D | TRP317 |
D | CYS320 |
D | HIS323 |
D | ARG364 |
D | ARG367 |
D | PHE378 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 |
Chain | Residue | Details |
P | LYS508 | |
Q | LYS508 | |
R | LYS508 | |
S | LYS508 |