5N9G
TFIIIB -TBP/Brf2/DNA and SANT domain of Bdp1-
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006352 | biological_process | DNA-templated transcription initiation |
| A | 0070897 | biological_process | transcription preinitiation complex assembly |
| B | 0003677 | molecular_function | DNA binding |
| B | 0006352 | biological_process | DNA-templated transcription initiation |
| F | 0006352 | biological_process | DNA-templated transcription initiation |
| F | 0070897 | biological_process | transcription preinitiation complex assembly |
| G | 0003677 | molecular_function | DNA binding |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue NA H 401 |
| Chain | Residue |
| H | GLY326 |
| H | PHE329 |
| H | PRO330 |
| H | ARG332 |
| H | HOH502 |
Functional Information from PROSITE/UniProt
| site_id | PS00351 |
| Number of Residues | 50 |
| Details | TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePRttaLIFsSGKMvctGAKseeqsrlAarkyarvV |
| Chain | Residue | Details |
| B | TYR192-VAL241 | |
| B | TYR283-LEU332 |
| site_id | PS00697 |
| Number of Residues | 9 |
| Details | DNA_LIGASE_A1 ATP-dependent DNA ligase AMP-binding site. EEKTNGWRI |
| Chain | Residue | Details |
| C | GLU344-ILE352 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 322 |
| Details | Repeat: {"description":"1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 306 |
| Details | Repeat: {"description":"2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 12 |
| Details | Region: {"description":"Interaction with target DNA","evidences":[{"source":"PubMed","id":"26638071","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4ROC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4ROD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4ROE","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 12 |
| Details | Region: {"description":"Required for the formation of a ternary complex with DNA and TBP; not required for interaction with TBP in the absence of DNA","evidences":[{"source":"PubMed","id":"26638071","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Cysteine sulfenic acid (-SOH)","evidences":[{"source":"PubMed","id":"26638071","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IYD","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 100 |
| Details | Domain: {"description":"Myb-like"} |
| Chain | Residue | Details |
