Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5N4E

Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - H698A mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008236molecular_functionserine-type peptidase activity
A0070012molecular_functionoligopeptidase activity
B0004252molecular_functionserine-type endopeptidase activity
B0005829cellular_componentcytosol
B0006508biological_processproteolysis
B0008236molecular_functionserine-type peptidase activity
B0070012molecular_functionoligopeptidase activity
C0035821biological_processmodulation of process of another organism
C0090729molecular_functiontoxin activity
D0035821biological_processmodulation of process of another organism
D0090729molecular_functiontoxin activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue GOL B 801
ChainResidue
BGLU268
BASN315
BILE316
BHOH1153

Functional Information from PROSITE/UniProt
site_idPS00708
Number of Residues31
DetailsPRO_ENDOPEP_SER Prolyl endopeptidase family serine active site. DfiaAaqfLvknkyaapgkvainGaSnGGLL
ChainResidueDetails
AASP552-LEU582

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: (3R,4S)-4-hydroxyisoleucine; in form gamma-amanitin => ECO:0000250|UniProtKB:P85421
ChainResidueDetails
CILE11
DILE11
AALA698
BSER577
BASP661
BALA698

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: 4-hydroxyproline => ECO:0000250|UniProtKB:P85421
ChainResidueDetails
CPRO18
DPRO18

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Cyclopeptide (Ile-Pro) => ECO:0000250|UniProtKB:P85421
ChainResidueDetails
DILE11
DPRO18
CILE11
CPRO18

site_idSWS_FT_FI4
Number of Residues4
DetailsCROSSLNK: 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys) => ECO:0000250|UniProtKB:P85421
ChainResidueDetails
DTRP12
DCYS16
CTRP12
CCYS16

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon