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5MY8

Crystal structure of SRPK1 in complex with SPHINX31

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue CIT A 701
ChainResidue
AARG515
AHOH829
AARG515
AARG518
AARG518
AARG561
AARG561
AGOL702
AHOH801
AHOH829

site_idAC2
Number of Residues10
Detailsbinding site for residue GOL A 702
ChainResidue
AASP213
AASN500
AASP511
AGLN513
AARG518
AARG561
ACIT701
AHOH801
AHOH813
AHOH1071

site_idAC3
Number of Residues6
Detailsbinding site for residue DMS A 703
ChainResidue
ATYR549
ATRP606
ALYS615
ATYR616
AEDO714
AHOH987

site_idAC4
Number of Residues2
Detailsbinding site for residue EDO A 704
ChainResidue
AGLY87
ATRP88

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 705
ChainResidue
ALEU648
AHIS650
APRO651
AASN654
AHOH806

site_idAC6
Number of Residues2
Detailsbinding site for residue EDO A 706
ChainResidue
ATHR205
AHOH811

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO A 708
ChainResidue
AASP138
AASN140
AASP201
ATYR202
ATHR205
ALYS206
AHOH847
AHOH874

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 709
ChainResidue
AASN529
APRO531
AGLU639
AHOH833

site_idAC9
Number of Residues2
Detailsbinding site for residue EDO A 710
ChainResidue
AVAL582
AALA583

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 711
ChainResidue
ATYR586
AHOH842
AHOH995

site_idAD2
Number of Residues4
Detailsbinding site for residue EDO A 712
ChainResidue
ATRP618
AGLU622
AHOH868
AHOH1031

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO A 713
ChainResidue
AASN140
AGLN198
AHOH815
AHOH819
AHOH823
AHOH911

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO A 714
ChainResidue
ATRP606
ALYS615
ADMS703

site_idAD5
Number of Residues3
Detailsbinding site for residue EDO A 715
ChainResidue
AASN157
ALYS615
AHOH910

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO A 716
ChainResidue
ALEU86
AHIS170
ATYR227
ARXZ724

site_idAD7
Number of Residues3
Detailsbinding site for residue EDO A 718
ChainResidue
AARG208
AHIS505
AHOH1048

site_idAD8
Number of Residues7
Detailsbinding site for residue EDO A 719
ChainResidue
ALYS640
AALA642
AGLU646
AEDO722
AHOH844
AHOH878
AHOH959

site_idAD9
Number of Residues4
Detailsbinding site for residue EDO A 720
ChainResidue
AHIS554
ATYR559
AASP564
AHOH861

site_idAE1
Number of Residues4
Detailsbinding site for residue EDO A 721
ChainResidue
AGLU510
AGLU557
ATHR560
AHOH817

site_idAE2
Number of Residues8
Detailsbinding site for residue EDO A 722
ChainResidue
AASP628
APRO632
AHIS650
AEDO719
AHOH878
AHOH901
AHOH934
AHOH994

site_idAE3
Number of Residues5
Detailsbinding site for residue EDO A 723
ChainResidue
ACYS207
ATRP503
AHOH1007
AHOH1027
ASER130

site_idAE4
Number of Residues21
Detailsbinding site for residue RXZ A 724
ChainResidue
ALEU86
ATRP88
AGLY89
ASER92
AVAL94
AALA107
ALYS109
APHE165
AGLU166
AVAL167
ALEU168
AGLY169
AHIS170
ALEU220
AVAL223
ATYR227
AILE228
ALEU231
AALA496
AEDO716
AHOH971

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues24
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGWGHFSTVWlSwdiqgkkf..........VAMK
ChainResidueDetails
ALEU86-LYS109

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IiHtDIKpeNILL
ChainResidueDetails
AILE209-LEU221

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AASP213

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:16209947
ChainResidueDetails
ALEU86
ALYS109
AGLU166

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine; by CK2 => ECO:0000269|PubMed:12565829
ChainResidueDetails
ASER555

219140

PDB entries from 2024-05-01

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