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5MLE

Crystal Structure of Human Dihydropyrimidinease-like 2 (DPYSL2A)/Collapsin Response Mediator Protein (CRMP2 13-516) Mutant Y479E/Y499E

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0016787molecular_functionhydrolase activity
A0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
C0005737cellular_componentcytoplasm
C0016787molecular_functionhydrolase activity
C0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue PEG C 601
ChainResidue
CSER142
CASP172
CARG173
CPHE174
CGLN175
CHOH790

site_idAC2
Number of Residues8
Detailsbinding site for residue EDO C 602
ChainResidue
CLYS398
CGLY399
CARG400
CASP406
CASP408
CPRO67
CGLY68
CARG397

site_idAC3
Number of Residues2
Detailsbinding site for residue EDO C 603
ChainResidue
CGLU221
CHOH770

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO C 604
ChainResidue
CASN244
CASN247
CGLY271

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO C 605
ChainResidue
CLYS297
CTYR431
CASN432
CGLU435

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO C 606
ChainResidue
CARG75
CPHE76
CMET78
CASP106
CHIS107
CVAL109
CTRP123

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO C 607
ChainResidue
CMET256
CSER282
CTHR285
CLEU307
CSER308
CTHR313
CPRO314

site_idAC8
Number of Residues6
Detailsbinding site for residue NI C 608
ChainResidue
CVAL72
CHIS73
CHIS107
CHIS138
CGLN196
CGLU277

site_idAC9
Number of Residues6
Detailsbinding site for residue PEG A 601
ChainResidue
APHE170
ALYS171
AGLN209
AARG227
AGLU353
AEDO606

site_idAD1
Number of Residues9
Detailsbinding site for residue PEG A 602
ChainResidue
AGLY40
ATHR102
AASP134
ALYS398
AASP406
AASP408
ASER448
AGLN449
AARG467

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 603
ChainResidue
ASER416
AVAL417
ALYS418

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 604
ChainResidue
AASN244
AASN247
AGLY271
AARG485

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO A 605
ChainResidue
AASN426
CGLU455
CHOH785

site_idAD5
Number of Residues7
Detailsbinding site for residue EDO A 606
ChainResidue
AGLN209
AHIS223
AARG227
APHE348
ATHR349
AGLU353
APEG601

site_idAD6
Number of Residues6
Detailsbinding site for residue NI A 607
ChainResidue
AVAL72
AHIS73
AHIS107
AHIS138
AGLN196
AGLU277

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Phosphotyrosine; by FYN => ECO:0000269|PubMed:19652227
ChainResidueDetails
CTYR32
ATYR32

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:O08553
ChainResidueDetails
CLYS258
ALYS258

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P47942
ChainResidueDetails
CSER259
ASER259

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:O08553
ChainResidueDetails
CTYR431
CGLU499
ATYR431
AGLU499

site_idSWS_FT_FI5
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:O08553
ChainResidueDetails
CSER465
CSER507
ASER465
ASER507

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:P47942
ChainResidueDetails
CCYS504
ACYS504

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:10757975, ECO:0007744|PubMed:16964243, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
CTHR509
ATHR509

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:O08553
ChainResidueDetails
CTHR512
ATHR512

site_idSWS_FT_FI9
Number of Residues2
DetailsMOD_RES: Phosphothreonine; by GSK3-beta => ECO:0007744|PubMed:21406692
ChainResidueDetails
CTHR514
ATHR514

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PDB entries from 2024-05-01

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