Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MFV

Crystal structure of the GluK1 ligand-binding domain in complex with kainate and BPAM-521 at 2.18 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 5PX A 901
ChainResidue
ALYS531
BILE519
BPRO532
BTHR535
BLYS762
BGLY763
APRO532
APHE533
AMET534
ATHR535
ALEU783
AGLN786
ALEU791
AHOH1001

site_idAC2
Number of Residues13
Detailsbinding site for residue 5PX A 902
ChainResidue
AILE519
APRO532
ATHR535
ASER761
ALYS762
AGLY763
BLYS531
BPRO532
BPHE533
BMET534
BLEU783
BGLN786
BLEU791

site_idAC3
Number of Residues13
Detailsbinding site for residue KAI A 903
ChainResidue
AGLU441
ATYR489
APRO516
ATHR518
AARG523
AGLY688
ASER689
ATHR690
ASER721
AGLU738
AHOH1036
AHOH1048
AHOH1057

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 904
ChainResidue
ALYS531
BLYS531
BHOH1070

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 905
ChainResidue
AGLN786
AHIS792
AHOH1031
BASP760
BSER761

site_idAC6
Number of Residues6
Detailsbinding site for residue GOL A 906
ChainResidue
ALYS488
ATYR489
AARG686
AASP687
AGLY688
ALYS719

site_idAC7
Number of Residues12
Detailsbinding site for residue KAI B 901
ChainResidue
BGLU441
BTYR489
BPRO516
BTHR518
BARG523
BGLY688
BSER689
BTHR690
BGLU738
BHOH1023
BHOH1043
BHOH1072

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 B 902
ChainResidue
AASP760
ASER761
BGLN786
BHIS792
BHOH1045
BHOH1079

site_idAC9
Number of Residues2
Detailsbinding site for residue SO4 B 903
ChainResidue
BARG459
BHOH1006

site_idAD1
Number of Residues3
Detailsbinding site for residue ACT B 904
ChainResidue
BARG448
BSER450
BLYS452

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:15710405, ECO:0007744|PDB:1YCJ
ChainResidueDetails
APRO516
ATHR518
ASER689
ATHR690
BPRO516
BTHR518
BSER689
BTHR690

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15710405, ECO:0000269|PubMed:15721240, ECO:0007744|PDB:1YCJ
ChainResidueDetails
AARG523
AGLU738
BARG523
BGLU738

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000255
ChainResidueDetails
ASER710
BSER710

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphothreonine; by PKC => ECO:0000255
ChainResidueDetails
ATHR746
BTHR746

site_idSWS_FT_FI5
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN431
AASN751
BASN431
BASN751

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon