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5MFV

Crystal structure of the GluK1 ligand-binding domain in complex with kainate and BPAM-521 at 2.18 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 5PX A 901
ChainResidue
ALYS531
BILE519
BPRO532
BTHR535
BLYS762
BGLY763
APRO532
APHE533
AMET534
ATHR535
ALEU783
AGLN786
ALEU791
AHOH1001

site_idAC2
Number of Residues13
Detailsbinding site for residue 5PX A 902
ChainResidue
AILE519
APRO532
ATHR535
ASER761
ALYS762
AGLY763
BLYS531
BPRO532
BPHE533
BMET534
BLEU783
BGLN786
BLEU791

site_idAC3
Number of Residues13
Detailsbinding site for residue KAI A 903
ChainResidue
AGLU441
ATYR489
APRO516
ATHR518
AARG523
AGLY688
ASER689
ATHR690
ASER721
AGLU738
AHOH1036
AHOH1048
AHOH1057

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 904
ChainResidue
ALYS531
BLYS531
BHOH1070

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 905
ChainResidue
AGLN786
AHIS792
AHOH1031
BASP760
BSER761

site_idAC6
Number of Residues6
Detailsbinding site for residue GOL A 906
ChainResidue
ALYS488
ATYR489
AARG686
AASP687
AGLY688
ALYS719

site_idAC7
Number of Residues12
Detailsbinding site for residue KAI B 901
ChainResidue
BGLU441
BTYR489
BPRO516
BTHR518
BARG523
BGLY688
BSER689
BTHR690
BGLU738
BHOH1023
BHOH1043
BHOH1072

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 B 902
ChainResidue
AASP760
ASER761
BGLN786
BHIS792
BHOH1045
BHOH1079

site_idAC9
Number of Residues2
Detailsbinding site for residue SO4 B 903
ChainResidue
BARG459
BHOH1006

site_idAD1
Number of Residues3
Detailsbinding site for residue ACT B 904
ChainResidue
BARG448
BSER450
BLYS452

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15710405","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YCJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15710405","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15721240","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YCJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PKC","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine; by PKC","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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