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5M80

Translation initiation factor 4E in complex with (RP)-iPr-m7GppSpG mRNA 5' cap analog

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
D0003723molecular_functionRNA binding
D0003743molecular_functiontranslation initiation factor activity
D0005737cellular_componentcytoplasm
D0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue 7L2 A 301
ChainResidue
APHE48
ATRP102
AGLU103
AARG157
ALYS162
AARG186
AHOH418
AHOH444
AHOH479
AHOH484
AHOH496
AASN50
AASP51
ALYS52
ALYS54
ATRP56
AGLN57
AASN59
AMET101

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL A 302
ChainResidue
ATHR116
AGLN121
AILE193
AHOH405
AHOH426

site_idAC3
Number of Residues18
Detailsbinding site for residue 7L2 B 301
ChainResidue
BPHE48
BASN50
BLYS52
BLYS54
BTRP56
BGLN57
BASN59
BMET101
BTRP102
BGLU103
BARG157
BLYS162
BARG186
BHOH416
BHOH434
BHOH435
BHOH477
BHOH490

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL B 302
ChainResidue
BILE115
BTHR116
BLEU117
BGLN121

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10394359, ECO:0000269|PubMed:9200613
ChainResidueDetails
ATRP56
BTRP102
BARG157
BTHR205
DTRP56
DTRP102
DARG157
DTHR205
ATRP102
AARG157
ATHR205
CTRP56
CTRP102
CARG157
CTHR205
BTRP56

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKC and MKNK2 => ECO:0000269|PubMed:17689282
ChainResidueDetails
ASER209
CSER209
BSER209
DSER209

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PDB entries from 2024-09-04

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