5M1N
Crystal structure of the large terminase nuclease from thermophilic phage G20c with bound Manganese
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 501 |
Chain | Residue |
A | ASN257 |
A | ARG409 |
A | TYR411 |
A | HOH621 |
A | HOH688 |
A | HOH764 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue MN A 502 |
Chain | Residue |
A | HOH645 |
A | HOH654 |
A | HOH753 |
A | ASP294 |
A | ASP429 |
A | HOH605 |
site_id | AC3 |
Number of Residues | 10 |
Details | binding site for residue SO4 B 501 |
Chain | Residue |
B | ASN257 |
B | ARG409 |
B | TYR411 |
B | ARG421 |
B | TYR423 |
B | GLY424 |
B | HOH612 |
B | HOH684 |
B | HOH720 |
B | HOH767 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue MN B 502 |
Chain | Residue |
B | ASP294 |
B | ASP429 |
B | HOH666 |
B | HOH770 |
B | HOH796 |
B | HOH808 |
site_id | AC5 |
Number of Residues | 7 |
Details | binding site for residue BTB B 503 |
Chain | Residue |
B | GLU378 |
B | SER382 |
B | GLN418 |
B | HOH609 |
B | HOH626 |
B | HOH647 |
B | HOH763 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:28100693 |
Chain | Residue | Details |
A | ASP294 | |
A | ASP347 | |
A | ASP429 | |
B | ASP294 | |
B | ASP347 | |
B | ASP429 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | SITE: Modulates nuclease activity => ECO:0000255|HAMAP-Rule:MF_04146 |
Chain | Residue | Details |
A | ASP300 | |
B | ASP300 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | SITE: Possible stabilization of Magnesium 1 => ECO:0000269|PubMed:28100693 |
Chain | Residue | Details |
A | ASP428 | |
B | ASP428 |