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5LOW

Structure of the Ca2+-bound Rabphilin 3A C2B domain SNAP25 complex (P21 space group)

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0016020cellular_componentmembrane
C0016020cellular_componentmembrane
D0000149molecular_functionSNARE binding
D0005249molecular_functionvoltage-gated potassium channel activity
D0017075molecular_functionsyntaxin-1 binding
F0000149molecular_functionSNARE binding
F0005249molecular_functionvoltage-gated potassium channel activity
F0017075molecular_functionsyntaxin-1 binding
H0016020cellular_componentmembrane
I0016020cellular_componentmembrane
J0016020cellular_componentmembrane
K0000149molecular_functionSNARE binding
K0005249molecular_functionvoltage-gated potassium channel activity
K0017075molecular_functionsyntaxin-1 binding
M0000149molecular_functionSNARE binding
M0005249molecular_functionvoltage-gated potassium channel activity
M0017075molecular_functionsyntaxin-1 binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue GOL A 701
ChainResidue
AGLN554
AGLU610
KGLN20

site_idAC2
Number of Residues5
Detailsbinding site for residue CA A 702
ChainResidue
AASP571
AASP577
AASP631
ATYR632
AASP633

site_idAC3
Number of Residues5
Detailsbinding site for residue CA A 703
ChainResidue
AASP571
AASP631
AASP633
AASP639
AMET570

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL B 701
ChainResidue
BLYS616
HLEU545
HGLU670

site_idAC5
Number of Residues7
Detailsbinding site for residue CA B 702
ChainResidue
BMET570
BASP571
BASP631
BASP633
BASP639
BCA703
BHOH806

site_idAC6
Number of Residues7
Detailsbinding site for residue CA B 703
ChainResidue
BASP571
BASP577
BASP631
BTYR632
BASP633
BCA702
JHOH804

site_idAC7
Number of Residues1
Detailsbinding site for residue GOL C 701
ChainResidue
CTRP672

site_idAC8
Number of Residues6
Detailsbinding site for residue CA C 702
ChainResidue
CMET570
CASP571
CASP631
CASP633
CASP639
CHOH806

site_idAC9
Number of Residues6
Detailsbinding site for residue CA C 703
ChainResidue
CASP571
CASP577
CASP631
CTYR632
CASP633
CHOH805

site_idAD1
Number of Residues6
Detailsbinding site for residue CA H 701
ChainResidue
HASP571
HASP577
HASP631
HTYR632
HASP633
HHOH802

site_idAD2
Number of Residues5
Detailsbinding site for residue CA H 702
ChainResidue
GHOH301
HMET570
HASP633
HASP639
HHOH803

site_idAD3
Number of Residues6
Detailsbinding site for residue CA I 701
ChainResidue
CASP614
IASP571
IASP577
IASP631
ITYR632
IASP633

site_idAD4
Number of Residues5
Detailsbinding site for residue CA I 702
ChainResidue
IMET570
IASP571
IASP631
IASP633
IASP639

site_idAD5
Number of Residues5
Detailsbinding site for residue CA J 701
ChainResidue
JMET570
JASP571
JASP633
JASP639
JHOH809

site_idAD6
Number of Residues5
Detailsbinding site for residue CA J 702
ChainResidue
JASP571
JASP577
JASP631
JTYR632
JASP633

site_idAD7
Number of Residues2
Detailsbinding site for residue GOL K 101
ChainResidue
HHIS617
KARG59

site_idAD8
Number of Residues4
Detailsbinding site for residue GOL M 101
ChainResidue
CGLY635
MASP19
MASP23
NGLU143

site_idAD9
Number of Residues3
Detailsbinding site for residue GOL N 301
ChainResidue
NTHR190
NASP193
NGLN197

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues798
DetailsDomain: {"description":"C2 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00041","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17166855","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2CM5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2CM6","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17166855","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2CM5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues124
DetailsDomain: {"description":"t-SNARE coiled-coil homology 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00202","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsSite: {"description":"(Microbial infection) Cleavage; by C.botulinum neurotoxin type E (BoNT/E)","evidences":[{"source":"PubMed","id":"8243676","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8294407","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8103915","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P60879","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine; by PKC","evidences":[{"source":"PubMed","id":"12459461","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues3
DetailsSite: {"description":"(Microbial infection) Cleavage; by C.botulinum neurotoxin type A (BoNT/A, botA)","evidences":[{"source":"PubMed","id":"8243676","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8294407","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8103915","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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