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5LI9

Structure of a nucleotide-bound form of PKCiota core kinase domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
A0007163biological_processestablishment or maintenance of cell polarity
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue ACP A 601
ChainResidue
AILE260
ALYS283
AILE332
AGLU333
AVAL335
AASP396
APHE552
AHOH718
AHOH724
AHOH729
AHOH739
AGLY261
AHOH795
AHOH816
AARG262
AGLY263
ASER264
ATYR265
AALA266
AVAL268
AALA281

site_idAC2
Number of Residues5
Detailsbinding site for residue FMT A 602
ChainResidue
AASN291
ASER486
AVAL487
ALYS488
AHOH722

site_idAC3
Number of Residues6
Detailsbinding site for residue FMT A 603
ChainResidue
AARG377
AASP378
ALEU379
AGLY415
ATHR416
ATYR419

site_idAC4
Number of Residues5
Detailsbinding site for residue FMT A 604
ChainResidue
AGLU325
AVAL571
AARG572
AILE574
AGLN576

site_idAC5
Number of Residues5
Detailsbinding site for residue FMT A 605
ChainResidue
AARG426
AARG483
ASER484
ALEU485
ALYS573

site_idAC6
Number of Residues5
Detailsbinding site for residue FMT A 606
ChainResidue
ALYS303
AHIS304
AVAL536
AHOH744
AHOH909

site_idAC7
Number of Residues4
Detailsbinding site for residue FMT A 607
ChainResidue
ASER495
AASN498
AGLU503
ALEU505

site_idAC8
Number of Residues3
Detailsbinding site for residue IMD A 609
ChainResidue
ATPO412
AHOH710
AHOH923

site_idAC9
Number of Residues3
Detailsbinding site for residue MRD A 610
ChainResidue
ALEU381
AGLU445
AGLY449

site_idAD1
Number of Residues8
Detailsbinding site for residue PEG A 611
ChainResidue
AMET341
ALYS380
ALEU381
AASP382
AASN418
ATYR419
AGLU445
ASER451

site_idAD2
Number of Residues6
Detailsbinding site for residue PEG A 612
ChainResidue
AARG272
AASP277
AILE279
APRO406
AGLN510
APHE547

site_idAD3
Number of Residues10
Detailsbinding site for residue PEG A 613
ChainResidue
ASER264
AGLU288
ALEU289
ASER491
AGLY518
AHIS519
APRO520
AHOH707
AHOH725
AHOH827

site_idAD4
Number of Residues6
Detailsbinding site for residue ACT A 614
ChainResidue
ATYR280
AGLY317
ALEU318
AASN586
AHOH713
AHOH799

site_idAD5
Number of Residues4
Detailsbinding site for residue ACT A 615
ChainResidue
AVAL299
AGLN300
AGLU578
APHE582

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues28
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. IGRGSYAKVLlVrlkktdriyamk......VVKK
ChainResidueDetails
AILE260-LYS287

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IiYrDLKldNVLL
ChainResidueDetails
AILE374-LEU386

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10027","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues9
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine; by SRC","evidences":[{"source":"PubMed","id":"11713277","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11891849","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine; by SRC","evidences":[{"source":"PubMed","id":"11713277","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine; by PDPK1","evidences":[{"source":"PubMed","id":"16125198","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"16125198","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues3
DetailsM-CSA 756
ChainResidueDetails
AASP378proton shuttle (general acid/base)
ALYS380electrostatic stabiliser
AASN383electrostatic stabiliser

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PDB entries from 2025-12-24

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