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5LHQ

The EGR-cmk active site inhibited catalytic domain of murine urokinase-type plasminogen activator in complex with the allosteric inhibitory nanobody Nb7

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue 0GJ A 301
ChainResidue
AHIS57
ASER214
ATRP215
AGLY216
AGLY218
ASO4304
AHOH412
ATYR99
AASP189
ASER190
ACYS191
ALYS192
AGLY193
ASER195
AVAL213

site_idAC2
Number of Residues3
Detailsbinding site for residue SO4 A 302
ChainResidue
AHIS100
AASN101
ALYS179

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 303
ChainResidue
AGLN167
AGLN170
AHIS170
ATYR171

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 304
ChainResidue
AGLY216
AARG217
AGLY218
A0GJ301

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 305
ChainResidue
ASER115
AARG116

site_idAC6
Number of Residues2
Detailsbinding site for residue SO4 A 306
ChainResidue
ATYR178
AARG230

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 A 307
ChainResidue
AASN202
AGLY205

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 308
ChainResidue
ATYR99
AHIS100
AASN101
AASP102
ALYS179
ATHR229
AHOH413

site_idAC9
Number of Residues2
Detailsbinding site for residue EDO A 309
ChainResidue
APRO125
AARG126

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 B 201
ChainResidue
BSER132
BSER133

site_idAD2
Number of Residues7
Detailsbinding site for residue SO4 B 202
ChainResidue
ASER110
BARG45
BGLY117
BTYR118
BGLY119
BTRP123
BHOH336

site_idAD3
Number of Residues2
Detailsbinding site for residue SO4 B 203
ChainResidue
BSER25
BGLY26

site_idAD4
Number of Residues3
Detailsbinding site for residue SO4 B 204
ChainResidue
BLEU18
BARG19
BHOH305

site_idAD5
Number of Residues4
Detailsbinding site for residue SO4 B 205
ChainResidue
BSER52
BSER53
BSER54
BHOH302

Functional Information from PROSITE/UniProt
site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPLI
ChainResidueDetails
AASP189-ILE200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS57
AASP102
ASER195

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PDB entries from 2024-07-17

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