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5K0Y

m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face

Functional Information from GO Data
ChainGOidnamespacecontents
a0003735molecular_functionstructural constituent of ribosome
a0005634cellular_componentnucleus
a0005730cellular_componentnucleolus
a0005737cellular_componentcytoplasm
a0005840cellular_componentribosome
a0006412biological_processtranslation
a0022626cellular_componentcytosolic ribosome
a1990904cellular_componentribonucleoprotein complex
b0003735molecular_functionstructural constituent of ribosome
b0005737cellular_componentcytoplasm
b0005783cellular_componentendoplasmic reticulum
b0005791cellular_componentrough endoplasmic reticulum
b0005829cellular_componentcytosol
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0022626cellular_componentcytosolic ribosome
b1990904cellular_componentribonucleoprotein complex
c0003723molecular_functionRNA binding
c0003735molecular_functionstructural constituent of ribosome
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0015935cellular_componentsmall ribosomal subunit
e0003735molecular_functionstructural constituent of ribosome
e0005634cellular_componentnucleus
e0005730cellular_componentnucleolus
e0005737cellular_componentcytoplasm
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0022626cellular_componentcytosolic ribosome
e1990904cellular_componentribonucleoprotein complex
f0003735molecular_functionstructural constituent of ribosome
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0015935cellular_componentsmall ribosomal subunit
g0003677molecular_functionDNA binding
g0003723molecular_functionRNA binding
g0003735molecular_functionstructural constituent of ribosome
g0005634cellular_componentnucleus
g0005730cellular_componentnucleolus
g0005737cellular_componentcytoplasm
g0005739cellular_componentmitochondrion
g0005743cellular_componentmitochondrial inner membrane
g0005819cellular_componentspindle
g0005840cellular_componentribosome
g0005856cellular_componentcytoskeleton
g0006281biological_processDNA repair
g0006412biological_processtranslation
g0006417biological_processregulation of translation
g0006915biological_processapoptotic process
g0006974biological_processDNA damage response
g0015935cellular_componentsmall ribosomal subunit
g0016020cellular_componentmembrane
g0016829molecular_functionlyase activity
g0022626cellular_componentcytosolic ribosome
g0022627cellular_componentcytosolic small ribosomal subunit
g0051301biological_processcell division
g0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
g1990904cellular_componentribonucleoprotein complex
g2001235biological_processpositive regulation of apoptotic signaling pathway
G0003723molecular_functionRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005634cellular_componentnucleus
G0005730cellular_componentnucleolus
G0005737cellular_componentcytoplasm
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0019843molecular_functionrRNA binding
G0022626cellular_componentcytosolic ribosome
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
h0003723molecular_functionRNA binding
h0003735molecular_functionstructural constituent of ribosome
h0005840cellular_componentribosome
h0006412biological_processtranslation
h0015935cellular_componentsmall ribosomal subunit
H0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005634cellular_componentnucleus
H0005730cellular_componentnucleolus
H0005737cellular_componentcytoplasm
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0015935cellular_componentsmall ribosomal subunit
H0022626cellular_componentcytosolic ribosome
H0022627cellular_componentcytosolic small ribosomal subunit
H1990904cellular_componentribonucleoprotein complex
i0003735molecular_functionstructural constituent of ribosome
i0005840cellular_componentribosome
i0006412biological_processtranslation
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005634cellular_componentnucleus
I0005730cellular_componentnucleolus
I0005737cellular_componentcytoplasm
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0019843molecular_functionrRNA binding
I0022626cellular_componentcytosolic ribosome
I0022627cellular_componentcytosolic small ribosomal subunit
I1990904cellular_componentribonucleoprotein complex
j0003735molecular_functionstructural constituent of ribosome
j0005634cellular_componentnucleus
j0005730cellular_componentnucleolus
j0005737cellular_componentcytoplasm
j0005840cellular_componentribosome
j0006412biological_processtranslation
j0022627cellular_componentcytosolic small ribosomal subunit
j1990904cellular_componentribonucleoprotein complex
J0002181biological_processcytoplasmic translation
J0003735molecular_functionstructural constituent of ribosome
J0005737cellular_componentcytoplasm
J0005783cellular_componentendoplasmic reticulum
J0005791cellular_componentrough endoplasmic reticulum
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0008270molecular_functionzinc ion binding
J0022626cellular_componentcytosolic ribosome
J0022627cellular_componentcytosolic small ribosomal subunit
J0046872molecular_functionmetal ion binding
J1990904cellular_componentribonucleoprotein complex
k0003735molecular_functionstructural constituent of ribosome
k0005840cellular_componentribosome
k0006412biological_processtranslation
K0003723molecular_functionRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0005634cellular_componentnucleus
K0005730cellular_componentnucleolus
K0005737cellular_componentcytoplasm
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0015935cellular_componentsmall ribosomal subunit
K0019843molecular_functionrRNA binding
K0022626cellular_componentcytosolic ribosome
K0022627cellular_componentcytosolic small ribosomal subunit
K0042274biological_processribosomal small subunit biogenesis
K1990904cellular_componentribonucleoprotein complex
l0000028biological_processribosomal small subunit assembly
l0002181biological_processcytoplasmic translation
l0003735molecular_functionstructural constituent of ribosome
l0005634cellular_componentnucleus
l0005730cellular_componentnucleolus
l0005737cellular_componentcytoplasm
l0005783cellular_componentendoplasmic reticulum
l0005791cellular_componentrough endoplasmic reticulum
l0005829cellular_componentcytosol
l0005840cellular_componentribosome
l0006364biological_processrRNA processing
l0006412biological_processtranslation
l0022626cellular_componentcytosolic ribosome
l0022627cellular_componentcytosolic small ribosomal subunit
l0030490biological_processmaturation of SSU-rRNA
l0032040cellular_componentsmall-subunit processome
l0042254biological_processribosome biogenesis
l0042274biological_processribosomal small subunit biogenesis
l0045202cellular_componentsynapse
l1990904cellular_componentribonucleoprotein complex
L0003676molecular_functionnucleic acid binding
L0003723molecular_functionRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0015935cellular_componentsmall ribosomal subunit
L0019843molecular_functionrRNA binding
L0022626cellular_componentcytosolic ribosome
L1990904cellular_componentribonucleoprotein complex
m0001891cellular_componentphagocytic cup
m0005634cellular_componentnucleus
m0005737cellular_componentcytoplasm
m0005840cellular_componentribosome
m0005886cellular_componentplasma membrane
m0006417biological_processregulation of translation
m0006915biological_processapoptotic process
m0007369biological_processgastrulation
m0015935cellular_componentsmall ribosomal subunit
m0016020cellular_componentmembrane
m0030425cellular_componentdendrite
m0042995cellular_componentcell projection
m0043022molecular_functionribosome binding
m0043204cellular_componentperikaryon
m0045182molecular_functiontranslation regulator activity
m0048471cellular_componentperinuclear region of cytoplasm
m0048511biological_processrhythmic process
m1990904cellular_componentribonucleoprotein complex
n0003723molecular_functionRNA binding
n0003735molecular_functionstructural constituent of ribosome
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0015935cellular_componentsmall ribosomal subunit
o0003735molecular_functionstructural constituent of ribosome
o0005634cellular_componentnucleus
o0005730cellular_componentnucleolus
o0005737cellular_componentcytoplasm
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0016020cellular_componentmembrane
o0022626cellular_componentcytosolic ribosome
o1990904cellular_componentribonucleoprotein complex
O0003676molecular_functionnucleic acid binding
O0003723molecular_functionRNA binding
p0003735molecular_functionstructural constituent of ribosome
p0005840cellular_componentribosome
p0006412biological_processtranslation
P0003676molecular_functionnucleic acid binding
P0003723molecular_functionRNA binding
P0003743molecular_functiontranslation initiation factor activity
P0005737cellular_componentcytoplasm
P0005850cellular_componenteukaryotic translation initiation factor 2 complex
P0006412biological_processtranslation
P0006413biological_processtranslational initiation
P0010494cellular_componentcytoplasmic stress granule
P0033290cellular_componenteukaryotic 48S preinitiation complex
P0034976biological_processresponse to endoplasmic reticulum stress
P0043022molecular_functionribosome binding
P0062197biological_processcellular response to chemical stress
q0003735molecular_functionstructural constituent of ribosome
q0005634cellular_componentnucleus
q0005730cellular_componentnucleolus
q0005737cellular_componentcytoplasm
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0022626cellular_componentcytosolic ribosome
q1990904cellular_componentribonucleoprotein complex
Q0003735molecular_functionstructural constituent of ribosome
Q0005634cellular_componentnucleus
Q0005730cellular_componentnucleolus
Q0005737cellular_componentcytoplasm
Q0005783cellular_componentendoplasmic reticulum
Q0005791cellular_componentrough endoplasmic reticulum
Q0005829cellular_componentcytosol
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0015935cellular_componentsmall ribosomal subunit
Q0022626cellular_componentcytosolic ribosome
Q1990904cellular_componentribonucleoprotein complex
r0003735molecular_functionstructural constituent of ribosome
r0005634cellular_componentnucleus
r0005730cellular_componentnucleolus
r0005737cellular_componentcytoplasm
r0005794cellular_componentGolgi apparatus
r0005829cellular_componentcytosol
r0005840cellular_componentribosome
r0006412biological_processtranslation
r0022626cellular_componentcytosolic ribosome
r0022627cellular_componentcytosolic small ribosomal subunit
r0032040cellular_componentsmall-subunit processome
r0042274biological_processribosomal small subunit biogenesis
r0043231cellular_componentintracellular membrane-bounded organelle
r0090263biological_processpositive regulation of canonical Wnt signaling pathway
r1990904cellular_componentribonucleoprotein complex
R0000028biological_processribosomal small subunit assembly
R0003723molecular_functionRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0005634cellular_componentnucleus
R0005730cellular_componentnucleolus
R0005737cellular_componentcytoplasm
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0022626cellular_componentcytosolic ribosome
R0022627cellular_componentcytosolic small ribosomal subunit
R1990904cellular_componentribonucleoprotein complex
s0003735molecular_functionstructural constituent of ribosome
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0022626cellular_componentcytosolic ribosome
s0022627cellular_componentcytosolic small ribosomal subunit
s1990904cellular_componentribonucleoprotein complex
S0000049molecular_functiontRNA binding
S0003924molecular_functionGTPase activity
S0005525molecular_functionGTP binding
T0001732biological_processformation of cytoplasmic translation initiation complex
T0002183biological_processcytoplasmic translational initiation
T0003723molecular_functionRNA binding
T0003743molecular_functiontranslation initiation factor activity
T0005737cellular_componentcytoplasm
T0005852cellular_componenteukaryotic translation initiation factor 3 complex
T0006412biological_processtranslation
T0006413biological_processtranslational initiation
T0016282cellular_componenteukaryotic 43S preinitiation complex
T0033290cellular_componenteukaryotic 48S preinitiation complex
T0071541cellular_componenteukaryotic translation initiation factor 3 complex, eIF3m
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0006412biological_processtranslation
U0015935cellular_componentsmall ribosomal subunit
V0003735molecular_functionstructural constituent of ribosome
V0005840cellular_componentribosome
V0006412biological_processtranslation
X0003735molecular_functionstructural constituent of ribosome
X0005634cellular_componentnucleus
X0005730cellular_componentnucleolus
X0005737cellular_componentcytoplasm
X0005813cellular_componentcentrosome
X0005840cellular_componentribosome
X0005856cellular_componentcytoskeleton
X0006364biological_processrRNA processing
X0006412biological_processtranslation
X0022626cellular_componentcytosolic ribosome
X0022627cellular_componentcytosolic small ribosomal subunit
X0030686cellular_component90S preribosome
X0032040cellular_componentsmall-subunit processome
X0042274biological_processribosomal small subunit biogenesis
X1990904cellular_componentribonucleoprotein complex
Y0003735molecular_functionstructural constituent of ribosome
Y0005634cellular_componentnucleus
Y0005730cellular_componentnucleolus
Y0005737cellular_componentcytoplasm
Y0005829cellular_componentcytosol
Y0005840cellular_componentribosome
Y0006364biological_processrRNA processing
Y0006412biological_processtranslation
Y0008270molecular_functionzinc ion binding
Y0014069cellular_componentpostsynaptic density
Y0022626cellular_componentcytosolic ribosome
Y0022627cellular_componentcytosolic small ribosomal subunit
Y0032040cellular_componentsmall-subunit processome
Y0042274biological_processribosomal small subunit biogenesis
Y0046872molecular_functionmetal ion binding
Y1990904cellular_componentribonucleoprotein complex
Z0003735molecular_functionstructural constituent of ribosome
Z0005634cellular_componentnucleus
Z0005730cellular_componentnucleolus
Z0005737cellular_componentcytoplasm
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0022626cellular_componentcytosolic ribosome
Z0022627cellular_componentcytosolic small ribosomal subunit
Z0070181molecular_functionsmall ribosomal subunit rRNA binding
Z1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA
ChainResidueDetails
UGLU70-ALA96

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR
ChainResidueDetails
aGLY100-ARG117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD
ChainResidueDetails
jLEU116-ASP138

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
QLYS60-ARG67

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS
ChainResidueDetails
GGLY123-SER135

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT
ChainResidueDetails
nASN98-THR122

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL
ChainResidueDetails
HGLY74-LEU92

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT
ChainResidueDetails
hALA43-THR58

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
ZVAL98-TYR128

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR
ChainResidueDetails
JARG22-ARG44

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK
ChainResidueDetails
IHIS8-LYS22

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE
ChainResidueDetails
sPHE64-GLU86

site_idPS00548
Number of Residues37
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG
ChainResidueDetails
gALA147-GLY183

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
qILE52-MET63

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGmkcsk.EVat.AI
ChainResidueDetails
cGLY104-ILE136

site_idPS00628
Number of Residues20
DetailsRIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE
ChainResidueDetails
RPRO89-GLU108

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI
ChainResidueDetails
KLEU106-ILE130

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ
ChainResidueDetails
LARG121-GLN134

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. VLTGsaDnSCRLWDC
ChainResidueDetails
TVAL67-CYS81
mALA78-LEU92
mILE120-THR134
mILE165-LEU179
mCYS207-LEU221

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH
ChainResidueDetails
eILE41-HIS56

site_idPS00733
Number of Residues8
DetailsRIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH
ChainResidueDetails
kTYR73-HIS80

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH
ChainResidueDetails
XARG78-HIS91

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
lGLU60-LEU68

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG
ChainResidueDetails
fVAL15-GLY26

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP
ChainResidueDetails
fPRO119-PRO143

site_idPS00996
Number of Residues9
DetailsRIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA
ChainResidueDetails
bLEU11-ALA19

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG
ChainResidueDetails
YLYS36-GLY68

site_idPS01189
Number of Residues19
DetailsRIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI
ChainResidueDetails
rALA17-ILE35

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL
ChainResidueDetails
iLEU62-LEU74

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG
ChainResidueDetails
oARG11-GLY30

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:P63325
ChainResidueDetails
tTYR12
jSER139
mTHR96
mTHR277

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P62263
ChainResidueDetails
jTHR133
gSER35
gSER104
gSER209
gSER224

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P62263
ChainResidueDetails
jLYS61
gTHR70
jLYS63
jLYS106

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
gLYS62
pLYS113

site_idSWS_FT_FI5
Number of Residues3
DetailsMOD_RES: Asymmetric dimethylarginine => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
gARG64
gARG65
gARG67

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P62908
ChainResidueDetails
gLYS132
ZLYS43

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
gLYS90
gLYS202

site_idSWS_FT_FI8
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
fLYS89
gLYS214

237735

PDB entries from 2025-06-18

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