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5ICW

Crystal structure of human NatF (hNaa60) homodimer bound to Coenzyme A

Functional Information from GO Data
ChainGOidnamespacecontents
A0004596molecular_functionprotein-N-terminal amino-acid acetyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
B0004596molecular_functionprotein-N-terminal amino-acid acetyltransferase activity
B0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
C0004596molecular_functionprotein-N-terminal amino-acid acetyltransferase activity
C0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
D0004596molecular_functionprotein-N-terminal amino-acid acetyltransferase activity
D0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
Functional Information from PDB Data
site_idAC1
Number of Residues24
Detailsbinding site for residue COA A 201
ChainResidue
ALEU101
AASN143
ATHR145
APHE149
AASN152
AARG153
AHOH319
AHOH322
AHOH331
AHOH334
AHOH337
AGLY102
AHOH353
AHOH375
AHOH385
AHOH389
CLYS76
AVAL103
AARG108
ALYS109
AHIS110
AGLY111
AGLY113
ASER114

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 202
ChainResidue
AVAL139
ALEU140
AASN143
AHOH342

site_idAC3
Number of Residues25
Detailsbinding site for residue COA B 201
ChainResidue
BPHE34
BLEU101
BGLY102
BVAL103
BARG108
BLYS109
BHIS110
BGLY111
BGLY113
BSER114
BASN143
BTHR145
BPHE149
BTYR150
BASN152
BARG153
BHOH305
BHOH320
BHOH322
BHOH328
BHOH334
BHOH348
BHOH361
BHOH366
BHOH372

site_idAC4
Number of Residues5
Detailsbinding site for residue CL B 202
ChainResidue
AILE167
BVAL139
BLEU140
BASN143
BHOH348

site_idAC5
Number of Residues26
Detailsbinding site for residue COA C 201
ChainResidue
AASN73
CPHE34
CLEU101
CGLY102
CVAL103
CARG108
CLYS109
CHIS110
CGLY111
CGLY113
CSER114
CASN143
CTHR145
CPHE149
CASN152
CARG153
CCL202
CHOH306
CHOH316
CHOH318
CHOH320
CHOH334
CHOH344
CHOH356
CHOH357
CHOH399

site_idAC6
Number of Residues3
Detailsbinding site for residue CL C 202
ChainResidue
CLEU140
CASN143
CCOA201

site_idAC7
Number of Residues25
Detailsbinding site for residue COA D 201
ChainResidue
DSER114
DASN143
DTHR145
DALA146
DPHE149
DTYR150
DASN152
DARG153
DHOH315
DHOH316
DHOH318
DHOH324
DHOH367
BASN73
BHOH340
DPHE34
DLEU101
DGLY102
DVAL103
DARG108
DLYS109
DHIS110
DGLY111
DILE112
DGLY113

site_idAC8
Number of Residues3
Detailsbinding site for residue CL D 202
ChainResidue
DLEU140
DASN143
DHOH369

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues338
DetailsDomain: {"description":"N-acetyltransferase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00532","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues44
DetailsRegion: {"description":"Required for homodimerization","evidences":[{"source":"PubMed","id":"27320834","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsActive site: {"evidences":[{"source":"PubMed","id":"27320834","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27550639","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27320834","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5ICV","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5ICW","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues44
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27320834","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27550639","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5HGZ","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5HH0","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5HH1","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5ICV","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5ICW","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsSite: {"description":"Required to position thioacetyl group","evidences":[{"source":"PubMed","id":"27550639","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues12
DetailsModified residue: {"description":"N6-acetyllysine; by autocatalysis","evidences":[{"source":"PubMed","id":"21981917","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues8
DetailsModified residue: {"description":"N6-acetyllysine; by autocatalysis","evidences":[{"source":"PubMed","id":"21981917","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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