Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006259 | biological_process | DNA metabolic process |
A | 0006281 | biological_process | DNA repair |
A | 0006303 | biological_process | double-strand break repair via nonhomologous end joining |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0044423 | cellular_component | virion component |
A | 0046872 | molecular_function | metal ion binding |
A | 0071897 | biological_process | DNA biosynthetic process |
B | 0003677 | molecular_function | DNA binding |
B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
B | 0006259 | biological_process | DNA metabolic process |
B | 0006281 | biological_process | DNA repair |
B | 0006303 | biological_process | double-strand break repair via nonhomologous end joining |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0044423 | cellular_component | virion component |
B | 0046872 | molecular_function | metal ion binding |
B | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 22 |
Details | binding site for residue DGT A 201 |
Chain | Residue |
A | GLY38 |
A | GLY118 |
A | VAL120 |
A | LEU123 |
A | MN202 |
A | MN203 |
A | GOL204 |
A | HOH301 |
A | HOH304 |
A | HOH310 |
A | HOH315 |
A | SER39 |
C | DG9 |
C | HOH101 |
D | DA9 |
A | ARG42 |
A | ASN48 |
A | ASP49 |
A | ASP51 |
A | HIS115 |
A | PHE116 |
A | THR117 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MN A 202 |
Chain | Residue |
A | ASP49 |
A | ASP51 |
A | DGT201 |
A | MN203 |
A | HOH301 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue MN A 203 |
Chain | Residue |
A | ASP49 |
A | ASP51 |
A | ASP100 |
A | DGT201 |
A | MN202 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue GOL A 204 |
Chain | Residue |
A | GLU44 |
A | MET46 |
A | DGT201 |
B | GLY-1 |
site_id | AC5 |
Number of Residues | 18 |
Details | binding site for residue DGT B 201 |
Chain | Residue |
B | GLY38 |
B | SER39 |
B | ARG42 |
B | ASN48 |
B | ASP49 |
B | ASP51 |
B | HIS115 |
B | PHE116 |
B | THR117 |
B | GLY118 |
B | VAL120 |
B | LEU123 |
B | MN202 |
B | MN203 |
B | HOH305 |
F | DG9 |
F | HOH102 |
G | DA9 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue MN B 202 |
Chain | Residue |
B | ASP49 |
B | ASP51 |
B | DGT201 |
B | MN203 |
B | HOH305 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue MN B 203 |
Chain | Residue |
B | ASP49 |
B | ASP51 |
B | ASP100 |
B | DGT201 |
B | MN202 |
Functional Information from PROSITE/UniProt
site_id | PS00522 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_X DNA polymerase family X signature. GSLrREekmLnDVDLLIivP |
Chain | Residue | Details |
A | GLY38-PRO57 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ASP49 | |
A | ASP51 | |
A | ASP100 | |
B | ASP49 | |
B | ASP51 | |
B | ASP100 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | SITE: Stabilizes dGTP in a syn confromation to overcome the Watson-Crick base pairing constraint => ECO:0000269|PubMed:24617852 |
Chain | Residue | Details |
A | HIS115 | |
B | HIS115 | |