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5GUL

Crystal structure of Tris/PPix2/Mg2+ bound form of cyclolavandulyl diphosphate synthase (CLDS) from Streptomyces sp. CL190

Functional Information from GO Data
ChainGOidnamespacecontents
A0016094biological_processpolyprenol biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0045547molecular_functiondehydrodolichyl diphosphate synthase activity
A0046872molecular_functionmetal ion binding
B0016094biological_processpolyprenol biosynthetic process
B0016740molecular_functiontransferase activity
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0045547molecular_functiondehydrodolichyl diphosphate synthase activity
B0046872molecular_functionmetal ion binding
C0016094biological_processpolyprenol biosynthetic process
C0016740molecular_functiontransferase activity
C0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
C0045547molecular_functiondehydrodolichyl diphosphate synthase activity
C0046872molecular_functionmetal ion binding
D0016094biological_processpolyprenol biosynthetic process
D0016740molecular_functiontransferase activity
D0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
D0045547molecular_functiondehydrodolichyl diphosphate synthase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue POP A 301
ChainResidue
AASP9
ATRS304
AHOH401
AHOH406
AHOH411
AHOH421
BTYR180
BARG211
BPHE212
BGLY213
BHOH425
AASN57
AARG60
AARG163
AARG169
ASER171
APHE173
APOP302
AMG303

site_idAC2
Number of Residues12
Detailsbinding site for residue POP A 302
ChainResidue
AASP9
AGLY10
AMET11
AARG12
AARG13
ATYR26
AARG60
APOP301
AMG303
ATRS304
AHOH421
BTYR215

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 303
ChainResidue
AASP9
APOP301
APOP302
AHOH401
AHOH421

site_idAC4
Number of Residues11
Detailsbinding site for residue TRS A 304
ChainResidue
APRO8
AASP9
AMET11
ATYR26
ATHR51
AALA52
AASN57
APHE68
APHE72
APOP301
APOP302

site_idAC5
Number of Residues19
Detailsbinding site for residue POP B 301
ChainResidue
ATYR180
AARG211
APHE212
AGLY213
AHOH412
BASP9
BASN57
BARG60
BARG163
BARG169
BSER171
BPHE173
BPOP302
BMG303
BTRS304
BHOH406
BHOH408
BHOH418
BHOH419

site_idAC6
Number of Residues13
Detailsbinding site for residue POP B 302
ChainResidue
ATYR215
BASP9
BGLY10
BMET11
BARG12
BARG13
BTYR26
BARG60
BPOP301
BMG303
BTRS304
BHOH406
BHOH419

site_idAC7
Number of Residues5
Detailsbinding site for residue MG B 303
ChainResidue
BASP9
BPOP301
BPOP302
BHOH406
BHOH419

site_idAC8
Number of Residues11
Detailsbinding site for residue TRS B 304
ChainResidue
BPRO8
BASP9
BMET11
BTYR26
BTHR51
BALA52
BASN57
BPHE68
BPHE72
BPOP301
BPOP302

site_idAC9
Number of Residues13
Detailsbinding site for residue POP C 301
ChainResidue
CARG13
CTYR26
CARG60
CPOP302
CMG303
CTRS304
CHOH402
CHOH416
DTYR215
CASP9
CGLY10
CMET11
CARG12

site_idAD1
Number of Residues18
Detailsbinding site for residue POP C 302
ChainResidue
CASP9
CASN57
CARG60
CARG163
CARG169
CSER171
CPOP301
CMG303
CTRS304
CHOH402
CHOH405
CHOH408
CHOH416
DTYR180
DARG211
DPHE212
DGLY213
DHOH406

site_idAD2
Number of Residues5
Detailsbinding site for residue MG C 303
ChainResidue
CASP9
CPOP301
CPOP302
CHOH402
CHOH416

site_idAD3
Number of Residues10
Detailsbinding site for residue TRS C 304
ChainResidue
CPRO8
CASP9
CTYR26
CTHR51
CALA52
CASN57
CPHE68
CPHE72
CPOP301
CPOP302

site_idAD4
Number of Residues13
Detailsbinding site for residue POP D 301
ChainResidue
CTYR215
CHOH413
DASP9
DGLY10
DMET11
DARG12
DARG13
DTYR26
DARG60
DPOP302
DMG303
DTRS304
DHOH407

site_idAD5
Number of Residues16
Detailsbinding site for residue POP D 302
ChainResidue
CTYR180
CARG211
CPHE212
CGLY213
CHOH413
DASP9
DASN57
DARG60
DARG163
DARG169
DSER171
DPHE173
DPOP301
DMG303
DTRS304
DHOH407

site_idAD6
Number of Residues5
Detailsbinding site for residue MG D 303
ChainResidue
CHOH413
DASP9
DPOP301
DPOP302
DHOH407

site_idAD7
Number of Residues10
Detailsbinding site for residue TRS D 304
ChainResidue
DPRO8
DASP9
DTYR26
DTHR51
DALA52
DASN57
DPHE68
DPHE72
DPOP301
DPOP302

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PDB entries from 2024-11-06

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