5GUL
Crystal structure of Tris/PPix2/Mg2+ bound form of cyclolavandulyl diphosphate synthase (CLDS) from Streptomyces sp. CL190
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0016094 | biological_process | polyprenol biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
A | 0045547 | molecular_function | dehydrodolichyl diphosphate synthase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0016094 | biological_process | polyprenol biosynthetic process |
B | 0016740 | molecular_function | transferase activity |
B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
B | 0045547 | molecular_function | dehydrodolichyl diphosphate synthase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0016094 | biological_process | polyprenol biosynthetic process |
C | 0016740 | molecular_function | transferase activity |
C | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
C | 0045547 | molecular_function | dehydrodolichyl diphosphate synthase activity |
C | 0046872 | molecular_function | metal ion binding |
D | 0016094 | biological_process | polyprenol biosynthetic process |
D | 0016740 | molecular_function | transferase activity |
D | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
D | 0045547 | molecular_function | dehydrodolichyl diphosphate synthase activity |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 19 |
Details | binding site for residue POP A 301 |
Chain | Residue |
A | ASP9 |
A | TRS304 |
A | HOH401 |
A | HOH406 |
A | HOH411 |
A | HOH421 |
B | TYR180 |
B | ARG211 |
B | PHE212 |
B | GLY213 |
B | HOH425 |
A | ASN57 |
A | ARG60 |
A | ARG163 |
A | ARG169 |
A | SER171 |
A | PHE173 |
A | POP302 |
A | MG303 |
site_id | AC2 |
Number of Residues | 12 |
Details | binding site for residue POP A 302 |
Chain | Residue |
A | ASP9 |
A | GLY10 |
A | MET11 |
A | ARG12 |
A | ARG13 |
A | TYR26 |
A | ARG60 |
A | POP301 |
A | MG303 |
A | TRS304 |
A | HOH421 |
B | TYR215 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue MG A 303 |
Chain | Residue |
A | ASP9 |
A | POP301 |
A | POP302 |
A | HOH401 |
A | HOH421 |
site_id | AC4 |
Number of Residues | 11 |
Details | binding site for residue TRS A 304 |
Chain | Residue |
A | PRO8 |
A | ASP9 |
A | MET11 |
A | TYR26 |
A | THR51 |
A | ALA52 |
A | ASN57 |
A | PHE68 |
A | PHE72 |
A | POP301 |
A | POP302 |
site_id | AC5 |
Number of Residues | 19 |
Details | binding site for residue POP B 301 |
Chain | Residue |
A | TYR180 |
A | ARG211 |
A | PHE212 |
A | GLY213 |
A | HOH412 |
B | ASP9 |
B | ASN57 |
B | ARG60 |
B | ARG163 |
B | ARG169 |
B | SER171 |
B | PHE173 |
B | POP302 |
B | MG303 |
B | TRS304 |
B | HOH406 |
B | HOH408 |
B | HOH418 |
B | HOH419 |
site_id | AC6 |
Number of Residues | 13 |
Details | binding site for residue POP B 302 |
Chain | Residue |
A | TYR215 |
B | ASP9 |
B | GLY10 |
B | MET11 |
B | ARG12 |
B | ARG13 |
B | TYR26 |
B | ARG60 |
B | POP301 |
B | MG303 |
B | TRS304 |
B | HOH406 |
B | HOH419 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue MG B 303 |
Chain | Residue |
B | ASP9 |
B | POP301 |
B | POP302 |
B | HOH406 |
B | HOH419 |
site_id | AC8 |
Number of Residues | 11 |
Details | binding site for residue TRS B 304 |
Chain | Residue |
B | PRO8 |
B | ASP9 |
B | MET11 |
B | TYR26 |
B | THR51 |
B | ALA52 |
B | ASN57 |
B | PHE68 |
B | PHE72 |
B | POP301 |
B | POP302 |
site_id | AC9 |
Number of Residues | 13 |
Details | binding site for residue POP C 301 |
Chain | Residue |
C | ARG13 |
C | TYR26 |
C | ARG60 |
C | POP302 |
C | MG303 |
C | TRS304 |
C | HOH402 |
C | HOH416 |
D | TYR215 |
C | ASP9 |
C | GLY10 |
C | MET11 |
C | ARG12 |
site_id | AD1 |
Number of Residues | 18 |
Details | binding site for residue POP C 302 |
Chain | Residue |
C | ASP9 |
C | ASN57 |
C | ARG60 |
C | ARG163 |
C | ARG169 |
C | SER171 |
C | POP301 |
C | MG303 |
C | TRS304 |
C | HOH402 |
C | HOH405 |
C | HOH408 |
C | HOH416 |
D | TYR180 |
D | ARG211 |
D | PHE212 |
D | GLY213 |
D | HOH406 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue MG C 303 |
Chain | Residue |
C | ASP9 |
C | POP301 |
C | POP302 |
C | HOH402 |
C | HOH416 |
site_id | AD3 |
Number of Residues | 10 |
Details | binding site for residue TRS C 304 |
Chain | Residue |
C | PRO8 |
C | ASP9 |
C | TYR26 |
C | THR51 |
C | ALA52 |
C | ASN57 |
C | PHE68 |
C | PHE72 |
C | POP301 |
C | POP302 |
site_id | AD4 |
Number of Residues | 13 |
Details | binding site for residue POP D 301 |
Chain | Residue |
C | TYR215 |
C | HOH413 |
D | ASP9 |
D | GLY10 |
D | MET11 |
D | ARG12 |
D | ARG13 |
D | TYR26 |
D | ARG60 |
D | POP302 |
D | MG303 |
D | TRS304 |
D | HOH407 |
site_id | AD5 |
Number of Residues | 16 |
Details | binding site for residue POP D 302 |
Chain | Residue |
C | TYR180 |
C | ARG211 |
C | PHE212 |
C | GLY213 |
C | HOH413 |
D | ASP9 |
D | ASN57 |
D | ARG60 |
D | ARG163 |
D | ARG169 |
D | SER171 |
D | PHE173 |
D | POP301 |
D | MG303 |
D | TRS304 |
D | HOH407 |
site_id | AD6 |
Number of Residues | 5 |
Details | binding site for residue MG D 303 |
Chain | Residue |
C | HOH413 |
D | ASP9 |
D | POP301 |
D | POP302 |
D | HOH407 |
site_id | AD7 |
Number of Residues | 10 |
Details | binding site for residue TRS D 304 |
Chain | Residue |
D | PRO8 |
D | ASP9 |
D | TYR26 |
D | THR51 |
D | ALA52 |
D | ASN57 |
D | PHE68 |
D | PHE72 |
D | POP301 |
D | POP302 |