5ELO
Crystal Structure of Lysyl-tRNA Synthetase from Cryptosporidium parvum complexed with L-lysine and cladosporin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000049 | molecular_function | tRNA binding |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0004824 | molecular_function | lysine-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
A | 0006430 | biological_process | lysyl-tRNA aminoacylation |
A | 0016020 | cellular_component | membrane |
B | 0000049 | molecular_function | tRNA binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
B | 0004824 | molecular_function | lysine-tRNA ligase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
B | 0006430 | biological_process | lysyl-tRNA aminoacylation |
B | 0016020 | cellular_component | membrane |
C | 0000049 | molecular_function | tRNA binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0003676 | molecular_function | nucleic acid binding |
C | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
C | 0004824 | molecular_function | lysine-tRNA ligase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006418 | biological_process | tRNA aminoacylation for protein translation |
C | 0006430 | biological_process | lysyl-tRNA aminoacylation |
C | 0016020 | cellular_component | membrane |
D | 0000049 | molecular_function | tRNA binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0003676 | molecular_function | nucleic acid binding |
D | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
D | 0004824 | molecular_function | lysine-tRNA ligase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006418 | biological_process | tRNA aminoacylation for protein translation |
D | 0006430 | biological_process | lysyl-tRNA aminoacylation |
D | 0016020 | cellular_component | membrane |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue LYS A 601 |
Chain | Residue |
A | GLU273 |
A | HOH907 |
A | HOH938 |
A | ARG295 |
A | GLU311 |
A | TYR313 |
A | ASN467 |
A | TYR469 |
A | GLU471 |
A | TRP517 |
A | KRS602 |
site_id | AC2 |
Number of Residues | 13 |
Details | binding site for residue KRS A 602 |
Chain | Residue |
A | ARG295 |
A | GLU297 |
A | THR302 |
A | HIS303 |
A | ASN304 |
A | PHE307 |
A | ALA309 |
A | GLU464 |
A | LEU465 |
A | ARG523 |
A | LYS601 |
A | HOH899 |
A | HOH940 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue SO4 A 603 |
Chain | Residue |
A | GLU297 |
A | HIS303 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 604 |
Chain | Residue |
A | ASP415 |
A | GLU423 |
A | GLU457 |
A | PHE459 |
A | GLU464 |
A | HOH809 |
site_id | AC5 |
Number of Residues | 12 |
Details | binding site for residue LYS B 601 |
Chain | Residue |
B | ALA250 |
B | ALA271 |
B | GLU273 |
B | ARG295 |
B | GLU311 |
B | TYR313 |
B | ASN467 |
B | TYR469 |
B | GLU471 |
B | KRS602 |
B | HOH870 |
B | HOH918 |
site_id | AC6 |
Number of Residues | 12 |
Details | binding site for residue KRS B 602 |
Chain | Residue |
B | ARG295 |
B | GLU297 |
B | THR302 |
B | HIS303 |
B | ASN304 |
B | PHE307 |
B | GLU464 |
B | LEU465 |
B | ASN467 |
B | ARG523 |
B | LYS601 |
B | HOH987 |
site_id | AC7 |
Number of Residues | 2 |
Details | binding site for residue SO4 B 603 |
Chain | Residue |
B | GLU297 |
B | HIS303 |
site_id | AC8 |
Number of Residues | 11 |
Details | binding site for residue LYS C 601 |
Chain | Residue |
C | ALA250 |
C | GLU273 |
C | ARG295 |
C | GLU311 |
C | TYR313 |
C | ASN467 |
C | TYR469 |
C | GLU471 |
C | KRS602 |
C | HOH874 |
C | HOH875 |
site_id | AC9 |
Number of Residues | 12 |
Details | binding site for residue KRS C 602 |
Chain | Residue |
C | ARG295 |
C | GLU297 |
C | THR302 |
C | HIS303 |
C | ASN304 |
C | PHE307 |
C | GLU464 |
C | LEU465 |
C | ARG523 |
C | LYS601 |
C | HOH837 |
C | HOH979 |
site_id | AD1 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 603 |
Chain | Residue |
C | GLU297 |
C | HIS303 |
C | HOH807 |
site_id | AD2 |
Number of Residues | 12 |
Details | binding site for residue LYS D 601 |
Chain | Residue |
D | ALA250 |
D | ALA271 |
D | GLU273 |
D | ARG295 |
D | GLU311 |
D | TYR313 |
D | ASN467 |
D | TYR469 |
D | GLU471 |
D | TRP517 |
D | HOH758 |
D | HOH828 |
site_id | AD3 |
Number of Residues | 12 |
Details | binding site for residue KRS D 602 |
Chain | Residue |
D | HIS303 |
D | ASN304 |
D | PHE307 |
D | ALA309 |
D | GLU464 |
D | LEU465 |
D | ARG523 |
D | HOH866 |
D | HOH885 |
D | ARG295 |
D | GLU297 |
D | THR302 |
site_id | AD4 |
Number of Residues | 8 |
Details | binding site for residue SO4 D 603 |
Chain | Residue |
C | LYS353 |
C | CYS354 |
C | HOH890 |
D | SER110 |
D | SER111 |
D | ILE114 |
D | HOH723 |
D | HOH740 |
site_id | AD5 |
Number of Residues | 2 |
Details | binding site for residue SO4 D 604 |
Chain | Residue |
D | GLU297 |
D | HIS303 |
site_id | AD6 |
Number of Residues | 3 |
Details | binding site for residue EDO D 605 |
Chain | Residue |
D | TRP445 |
D | HIS446 |
D | HOH809 |