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5DUO

Crystal structure of native translocator protein 18kDa (TSPO) from Rhodobacter sphaeroides (A139T Mutant) in C2 space group

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008289molecular_functionlipid binding
A0016020cellular_componentmembrane
A0033013biological_processtetrapyrrole metabolic process
A0042802molecular_functionidentical protein binding
A0046906molecular_functiontetrapyrrole binding
B0005886cellular_componentplasma membrane
B0008289molecular_functionlipid binding
B0016020cellular_componentmembrane
B0033013biological_processtetrapyrrole metabolic process
B0042802molecular_functionidentical protein binding
B0046906molecular_functiontetrapyrrole binding
C0005886cellular_componentplasma membrane
C0008289molecular_functionlipid binding
C0016020cellular_componentmembrane
C0033013biological_processtetrapyrrole metabolic process
C0042802molecular_functionidentical protein binding
C0046906molecular_functiontetrapyrrole binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue OLC A 201
ChainResidue
AASN2
AMET3
ASER52
ALEU56
AMET62
AARG63
AOLC204
CPHE119

site_idAC2
Number of Residues5
Detailsbinding site for residue OLC A 202
ChainResidue
AHOH308
BALA6
BTHR10
BOLC203
APHE76

site_idAC3
Number of Residues6
Detailsbinding site for residue OLC A 203
ChainResidue
AALA6
ATHR10
ALEU12
AALA13
APP9208
BTRP116

site_idAC4
Number of Residues5
Detailsbinding site for residue OLC A 204
ChainResidue
ATRP124
AVAL130
APRO131
AOLC201
AHOH309

site_idAC5
Number of Residues3
Detailsbinding site for residue OLC A 205
ChainResidue
ATRP108
ATHR137
AGLY141

site_idAC6
Number of Residues4
Detailsbinding site for residue FMT A 206
ChainResidue
AASP4
ATRP5
AALA6
COLC202

site_idAC7
Number of Residues4
Detailsbinding site for residue FMT A 207
ChainResidue
AMET3
ATRP5
CTRP116
CPHE119

site_idAC8
Number of Residues19
Detailsbinding site for residue PP9 A 208
ChainResidue
APRO18
AALA19
AGLY22
AALA23
ALEU25
AARG43
APHE46
APRO47
ATRP50
ATYR54
AASN84
ATRP87
ATHR88
APHE92
ATRP135
ATHR139
AOLC203
CTRP38
CTRP39

site_idAC9
Number of Residues4
Detailsbinding site for residue OLC B 201
ChainResidue
BTRP44
BVAL45
BLEU48
COLC203

site_idAD1
Number of Residues7
Detailsbinding site for residue OLC B 202
ChainResidue
BTRP108
BMET115
BTRP116
BPHE119
BGLN120
BTHR123
CTRP5

site_idAD2
Number of Residues6
Detailsbinding site for residue OLC B 203
ChainResidue
AOLC202
BASP4
BTRP5
BALA6
BLEU12
BALA13

site_idAD3
Number of Residues4
Detailsbinding site for residue OLC B 204
ChainResidue
ATRP38
ATRP39
APRO41
COLC203

site_idAD4
Number of Residues3
Detailsbinding site for residue OLC B 205
ChainResidue
AGLU29
BLEU59
BTRP124

site_idAD5
Number of Residues5
Detailsbinding site for residue OLC B 206
ChainResidue
BLEU109
BPHE144
BMET147
BARG148
BTRP151

site_idAD6
Number of Residues8
Detailsbinding site for residue OLC C 201
ChainResidue
CTHR10
CLEU12
CALA13
CGLN72
CPHE76
CTRP116
COLC204
CHOH302

site_idAD7
Number of Residues5
Detailsbinding site for residue OLC C 202
ChainResidue
AFMT206
CTRP108
CLEU109
CTRP116
CTHR140

site_idAD8
Number of Residues9
Detailsbinding site for residue OLC C 203
ChainResidue
BTRP44
BOLC201
BOLC204
CPRO42
CTRP44
CLEU48
APRO42
ATRP44
BPRO42

site_idAD9
Number of Residues5
Detailsbinding site for residue OLC C 204
ChainResidue
CALA13
CALA102
CPHE110
CTRP116
COLC201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues60
DetailsTRANSMEM: Helical; Name=1 => ECO:0000269|PubMed:25635101
ChainResidueDetails
ATRP5-LEU25
BTRP5-LEU25
CTRP5-LEU25

site_idSWS_FT_FI2
Number of Residues63
DetailsTRANSMEM: Helical; Name=2 => ECO:0000269|PubMed:25635101
ChainResidueDetails
ATRP44-ALA65
BTRP44-ALA65
CTRP44-ALA65

site_idSWS_FT_FI3
Number of Residues60
DetailsTRANSMEM: Helical; Name=3 => ECO:0000269|PubMed:25635101
ChainResidueDetails
AALA73-GLY93
BALA73-GLY93
CALA73-GLY93

site_idSWS_FT_FI4
Number of Residues66
DetailsTRANSMEM: Helical; Name=4 => ECO:0000269|PubMed:25635101
ChainResidueDetails
AMET97-PHE119
BMET97-PHE119
CMET97-PHE119

site_idSWS_FT_FI5
Number of Residues60
DetailsTRANSMEM: Helical; Name=5 => ECO:0000269|PubMed:25635101
ChainResidueDetails
ATRP124-PHE144
BTRP124-PHE144
CTRP124-PHE144

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PDB entries from 2024-07-17

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