Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DKD

Crystal structure of the bromodomain of human BRG1 (SMARCA4) in complex with PFI-3 chemical probe

Functional Information from GO Data
ChainGOidnamespacecontents
A0006338biological_processchromatin remodeling
A0016586cellular_componentRSC-type complex
B0006338biological_processchromatin remodeling
B0016586cellular_componentRSC-type complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue ZN A 1601
ChainResidue
AHIS1517
AHOH1740
BHOH1712
BHOH1719
BHOH1723
BHOH1747

site_idAC2
Number of Residues4
Detailsbinding site for residue EDO A 1602
ChainResidue
ALYS1518
AGLU1512
AARG1513
AASN1516

site_idAC3
Number of Residues2
Detailsbinding site for residue EDO A 1603
ChainResidue
AASP1506
ALYS1509

site_idAC4
Number of Residues2
Detailsbinding site for residue EDO A 1604
ChainResidue
AGLN1487
BEDO1604

site_idAC5
Number of Residues9
Detailsbinding site for residue 5BW A 1605
ChainResidue
AVAL1484
APHE1485
ALEU1488
APRO1489
ATYR1497
AVAL1505
AALA1536
AASN1540
AILE1546

site_idAC6
Number of Residues6
Detailsbinding site for residue ZN B 1601
ChainResidue
AHOH1709
AHOH1714
AHOH1735
AHOH1750
BHIS1517
BHOH1741

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO B 1602
ChainResidue
AASN1523
BGLN1487
BLYS1508
BEDO1603
BHOH1736
BHOH1744

site_idAC8
Number of Residues2
Detailsbinding site for residue EDO B 1603
ChainResidue
BGLN1487
BEDO1602

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO B 1604
ChainResidue
AEDO1604
BASN1523
BHOH1703

site_idAD1
Number of Residues9
Detailsbinding site for residue 5BW B 1605
ChainResidue
BVAL1484
BPHE1485
BLEU1488
BPRO1489
BTYR1497
BVAL1505
BALA1536
BASN1540
BILE1546

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues58
DetailsBROMODOMAIN_1 Bromodomain signature. SevFiqlpSrkelp..EYYelIrkpVdfkkIkerirnhk..Yrslndlekdvml.LcqNAqtF
ChainResidueDetails
ASER1482-PHE1539

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q3TKT4
ChainResidueDetails
APRO1456
BPRO1456

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163
ChainResidueDetails
APHE1485
BPHE1485

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon