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5DEL

Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM59

Replaces:  4RYH
Functional Information from GO Data
ChainGOidnamespacecontents
A0004152molecular_functiondihydroorotate dehydrogenase activity
A0005737cellular_componentcytoplasm
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0016020cellular_componentmembrane
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue FMN A 601
ChainResidue
AALA224
ASER457
ASER477
AGLY478
ASER505
AGLY506
AGLY507
ATYR528
ASER529
AORO602
AHOH710
AALA225
AHOH720
AHOH744
AGLY226
ALYS229
ATHR249
AILE263
AASN274
AASN342
ALYS429

site_idAC2
Number of Residues11
Detailsbinding site for residue ORO A 602
ChainResidue
ALYS229
AASN274
ACYS276
AGLY277
APHE278
AASN342
ASER345
AASN347
AASN458
ATHR459
AFMN601

site_idAC3
Number of Residues12
Detailsbinding site for residue D59 A 603
ChainResidue
ALEU176
AGLY181
AGLU182
AHIS185
APHE188
APHE227
AILE263
AARG265
ATYR528
AVAL532
AGLY535
AMET536

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL A 604
ChainResidue
ALYS193
AGLY231
AVAL232
AASN289
ALEU292
AARG296

site_idAC5
Number of Residues6
Detailsbinding site for residue LDA A 605
ChainResidue
AGLU164
ALEU167
ATYR168
AASN195
AILE196
ALEU197

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 606
ChainResidue
ATHR318
AVAL319
AASN320
AASP323
AASP323
AASP324
AHOH722
AHOH722

Functional Information from PROSITE/UniProt
site_idPS00911
Number of Residues20
DetailsDHODEHASE_1 Dihydroorotate dehydrogenase signature 1. SfieiGTITprgQtGNakPR
ChainResidueDetails
ASER243-ARG262

site_idPS00912
Number of Residues21
DetailsDHODEHASE_2 Dihydroorotate dehydrogenase signature 2. IIAsGGIfSgldAleKIeAGA
ChainResidueDetails
AILE502-ALA522

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000250
ChainResidueDetails
ASER345

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16510978, ECO:0000269|PubMed:20702404
ChainResidueDetails
AALA225
ATHR249
ATHR459
AGLY507
AGLY535
ALEU558

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING:
ChainResidueDetails
ALYS229
AASN274
AASN342
AASN347
APHE488

218853

PDB entries from 2024-04-24

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