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5D1P

Archaeal ATP-dependent RNA ligase - form 2

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue SO4 A 501
ChainResidue
AARG76
AAPK97
ALYS246
AARG278
ASO4502
AHOH635
AHOH690
AHOH697

site_idAC2
Number of Residues8
Detailsbinding site for residue SO4 A 502
ChainResidue
AILE74
AAPK97
AARG118
ALYS246
ASO4501
AHOH656
AHOH660
ALYS73

site_idAC3
Number of Residues8
Detailsbinding site for residue SO4 A 503
ChainResidue
APRO20
AARG23
AGLN251
AARG298
AARG299
AHOH663
AHOH700
AHOH703

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 504
ChainResidue
AAPK97
AHOH622
AHOH624
AHOH648
AHOH658
AHOH694

site_idAC5
Number of Residues8
Detailsbinding site for residue SO4 B 501
ChainResidue
BARG76
BAPK97
BLYS246
BARG278
BSO4502
BHOH603
BHOH665
BHOH727

site_idAC6
Number of Residues8
Detailsbinding site for residue SO4 B 502
ChainResidue
BLYS73
BILE74
BAPK97
BARG118
BLYS246
BSO4501
BHOH634
BHOH659

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 B 503
ChainResidue
BASP163
BARG255

site_idAC8
Number of Residues6
Detailsbinding site for residue MG B 504
ChainResidue
BAPK97
BHOH614
BHOH620
BHOH630
BHOH662
BHOH713

246905

PDB entries from 2025-12-31

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