Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D1P

Archaeal ATP-dependent RNA ligase - form 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2009-01-08
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5414
Spacegroup nameP 1 21 1
Unit cell lengths50.500, 115.304, 91.567
Unit cell angles90.00, 104.55, 90.00
Refinement procedure
Resolution29.365 - 2.199
R-factor0.1937
Rwork0.192
R-free0.24130
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.022
RMSD bond angle1.306
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]30.000
High resolution limit [Å]2.200
Number of reflections45957
<I/σ(I)>9.69
Completeness [%]89.3
Redundancy3.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M Tris-HCl (pH 8.5), 0.2 M Lithium Sulfate and 40 % PEG400

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon