Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001764 | biological_process | neuron migration |
A | 0007417 | biological_process | central nervous system development |
A | 0070325 | molecular_function | lipoprotein particle receptor binding |
B | 0005509 | molecular_function | calcium ion binding |
C | 0001764 | biological_process | neuron migration |
C | 0007417 | biological_process | central nervous system development |
C | 0070325 | molecular_function | lipoprotein particle receptor binding |
D | 0005509 | molecular_function | calcium ion binding |
Functional Information from PROSITE/UniProt
site_id | PS00010 |
Number of Residues | 12 |
Details | ASX_HYDROXYL Aspartic acid and asparagine hydroxylation site. CtDlkigFeCtC |
Chain | Residue | Details |
B | CYS221-CYS232 | |
B | CYS260-CYS271 | |
site_id | PS00022 |
Number of Residues | 12 |
Details | EGF_1 EGF-like domain signature 1. CiCdpGysGPtC |
Chain | Residue | Details |
A | CYS2149-CYS2160 | |
A | CYS2497-CYS2508 | |
site_id | PS01186 |
Number of Residues | 15 |
Details | EGF_2 EGF-like domain signature 2. CtCpaGFqlldqkt.C |
Chain | Residue | Details |
B | CYS230-CYS244 | |
B | CYS269-CYS284 | |
A | CYS2149-CYS2160 | |
site_id | PS01187 |
Number of Residues | 24 |
Details | EGF_CA Calcium-binding EGF-like domain signature. DiDECkdpda.........Csqi....CvNykgyFkC |
Chain | Residue | Details |
B | ASP246-CYS269 | |
site_id | PS01209 |
Number of Residues | 23 |
Details | LDLRA_1 LDL-receptor class A (LDLRA) domain signature. CIpsvwr.CDeddDCldhsDEDd....C |
Chain | Residue | Details |
B | CYS58-CYS80 | |
B | CYS97-CYS121 | |
B | CYS140-CYS162 | |
B | CYS181-CYS203 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 22 |
Details | Repeat: {"description":"BNR 9"} |
site_id | SWS_FT_FI2 |
Number of Residues | 22 |
Details | Repeat: {"description":"BNR 10"} |
site_id | SWS_FT_FI3 |
Number of Residues | 22 |
Details | Repeat: {"description":"BNR 11"} |
site_id | SWS_FT_FI4 |
Number of Residues | 22 |
Details | Repeat: {"description":"BNR 12"} |
site_id | SWS_FT_FI5 |
Number of Residues | 12 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"17548821","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2E26","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI6 |
Number of Residues | 8 |
Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"17548821","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI7 |
Number of Residues | 72 |
Details | Domain: {"description":"LDL-receptor class A 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00124","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI8 |
Number of Residues | 76 |
Details | Domain: {"description":"LDL-receptor class A 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00124","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI9 |
Number of Residues | 78 |
Details | Domain: {"description":"EGF-like 2; calcium-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00076","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI10 |
Number of Residues | 92 |
Details | Repeat: {"description":"LDL-receptor class B 1"} |
site_id | SWS_FT_FI11 |
Number of Residues | 84 |
Details | Repeat: {"description":"LDL-receptor class B 2"} |
site_id | SWS_FT_FI12 |
Number of Residues | 86 |
Details | Repeat: {"description":"LDL-receptor class B 3"} |
site_id | SWS_FT_FI13 |
Number of Residues | 86 |
Details | Repeat: {"description":"LDL-receptor class B 4"} |
site_id | SWS_FT_FI14 |
Number of Residues | 82 |
Details | Repeat: {"description":"LDL-receptor class B 5"} |
site_id | SWS_FT_FI15 |
Number of Residues | 12 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"20223215","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3A7Q","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI16 |
Number of Residues | 6 |
Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]} |